RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 CYTL1Q9NRR1 136 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 MRPL16Q9NX20 251 aaKnown RBP0.81□□□□□ -2.28
PMS1-210ENST00000424307 MED29Q9NX70 200 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 ZNF586Q9NXT0 402 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 BET1LQ9NYM9 111 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 TAS2R8Q9NYW2 309 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 TECRQ9NZ01 308 aaKnown RBP0.81□□□□□ -2.28
PMS1-210ENST00000424307 LHX3Q9UBR4 397 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 NAT8Q9UHE5 227 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 VAX2Q9UIW0 290 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 FUT9Q9Y231 359 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 HS3ST2Q9Y278 367 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 SIGLEC7Q9Y286 467 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 KLHDC2Q9Y2U9 406 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 LSM2Q9Y333 95 aaKnown RBP0.81□□□□□ -2.28
PMS1-210ENST00000424307 FIS1Q9Y3D6 152 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 AK6Q9Y3D8 172 aaKnown RBP0.81□□□□□ -2.28
PMS1-210ENST00000424307 NEUROG3Q9Y4Z2 214 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 WSB1Q9Y6I7 421 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 UBR2Q8IWV8 1755 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 USP6P35125 1406 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 ADAMTSL3P82987 1691 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 SCN7AQ01118 1682 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 LCTP09848 1927 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 PTPRJQ12913 1337 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 THADAQ6YHU6 1953 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 CASP8AP2Q9UKL3 1982 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 DOT1LQ8TEK3 1739 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 PXDNLA1KZ92 1463 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 PTPRMP28827 1452 aa0.81□□□□□ -2.28
PMS1-210ENST00000424307 FANCMQ8IYD8 2048 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SCN3AQ9NY46 2000 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SLIT1O75093 1534 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 A0A087WUU8 490 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 IGHV2-26A0A0B4J1V2 119 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 A0A0B4J2A0 478 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 CCL15-CCL14A0A0B4J2E2 113 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 IGHV3-35A0A0C4DH35 117 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 MUC21A0A0G2JKD1 596 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 A0A0G2JMM0 328 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 ZNF816-ZNF321PA0A0X1KG74 233 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 LOC102725191A0A1B0GVB3 256 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TINCRA0A1B0GVN0 87 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 LOC285095A0A1B0GVY8 99 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 A0A1W2PPB8 328 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TMEM213A2RRL7 107 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 LRP5LA4QPB2 252 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 MAP1LC3B2A6NCE7 125 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 FAM231BA6NCW3 169 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 FAM159BA6NKW6 160 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 LRRC30A6NM36 301 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 OR4C45A6NMZ5 311 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 IFITM5A6NNB3 132 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 ZNF850A8MQ14 1090 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 FABP5P3A8MUU1 101 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 KIR3DP1A8MWS1 328 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 PPP5D1E7EU14 171 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 CLDN34H7C241 214 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 CLDN5O00501 218 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 GNGT2O14610 69 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TNFSF11O14788 317 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 DEGS1O15121 323 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 HMGB3O15347 200 aaKnown RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 ENSAO43768 121 aaKnown RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 MPZL2O60487 215 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 CREBL2O60519 120 aaPredicted RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 FOXH1O75593 365 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 FCN3O75636 299 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SNAPC5O75971 98 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 PROSCO94903 275 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TMEM50AO95807 157 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SOD1P00441 154 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 CA1P00915 261 aaPredicted RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 NRASP01111 189 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 HRASP01112 189 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 KRASP01116 189 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 IFNA1P01562 189 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 MT-ATP8P03928 68 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 P04436 131 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SMIM17P0DL12 118 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 LINC00694P0DN24 101 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 PSG2P11465 335 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 SLC25A6P12236 298 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 ATF1P18846 271 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TCN2P20062 427 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 NTF3P20783 257 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 GPX3P22352 226 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 HTR1EP28566 365 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 TSPOP30536 169 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 FGF9P31371 208 aaPredicted RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 RPL22P35268 128 aaKnown RBP0.8□□□□□ -2.28
PMS1-210ENST00000424307 ARL2P36404 184 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 GYG1P46976 350 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 OR3A4PP47883 348 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 OR1E2P47887 323 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 UQCRFS1P47985 274 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 INSL3P51460 131 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 PIGPP57054 158 aa0.8□□□□□ -2.28
PMS1-210ENST00000424307 MTPNP58546 118 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms