RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TSPAN5P62079 268 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 DEFA5Q01523 94 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 EIF4EBP1Q13541 118 aaPredicted RBP11.7□□□□□ -0.54
USB1-202ENST00000423271 MRGPRG-AS1Q2M3A8 158 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 TMEM177Q53S58 311 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 CCDC190Q86UF4 302 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 POC5Q8NA72 575 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 TMEM229BQ8NBD8 167 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 OR5T1Q8NG75 326 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 DDB2Q92466 427 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 MOB3AQ96BX8 217 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 ADTRPQ96IZ2 230 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 RHOVQ96L33 236 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 TINAGL1Q9GZM7 467 aaPredicted RBP11.7□□□□□ -0.54
USB1-202ENST00000423271 SLA2Q9H6Q3 261 aa11.7□□□□□ -0.54
USB1-202ENST00000423271 GSTZ1O43708 216 aaPredicted RBP11.69□□□□□ -0.54
USB1-202ENST00000423271 RPL30P62888 115 aaKnown RBP11.69□□□□□ -0.54
USB1-202ENST00000423271 SSBP1Q04837 148 aaKnown RBP11.69□□□□□ -0.54
USB1-202ENST00000423271 ZNF79Q15937 498 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 RTL8BQ17RB0 113 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 RNASE10Q5GAN6 216 aaKnown RBP11.69□□□□□ -0.54
USB1-202ENST00000423271 ZNF818PQ6ZRF7 136 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 ZNF429Q86V71 674 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 OR4D10Q8NGI6 311 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 OR6F1Q8NGZ6 308 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 ZNF355PQ9NSJ1 428 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 TAS2R8Q9NYW2 309 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 STAB2Q8WWQ8 2551 aa11.69□□□□□ -0.54
USB1-202ENST00000423271 TNFSF12O43508 249 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 RAB3DO95716 219 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 CRYZL1O95825 349 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 CD74P04233 296 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 HSPB1P04792 205 aaKnown RBP11.68□□□□□ -0.54
USB1-202ENST00000423271 APELAP0DMC3 54 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 CD40LGP29965 261 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 TAS2R19P59542 299 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 TAGLNQ01995 201 aaKnown RBP11.68□□□□□ -0.54
USB1-202ENST00000423271 CBX3Q13185 183 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 MSMO1Q15800 293 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 PYDC2Q56P42 97 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 STEAP1BQ6NZ63 245 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 IDO2Q6ZQW0 420 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 MFSD4AQ8N468 514 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 HSD17B10Q99714 261 aaKnown RBP11.68□□□□□ -0.54
USB1-202ENST00000423271 ASCL2Q99929 193 aa11.68□□□□□ -0.54
USB1-202ENST00000423271 NBEAL2Q6ZNJ1 2754 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 IFNA6P05013 189 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 RRASP10301 218 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 SPNP16150 400 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 TBPP20226 339 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 ACSM6Q6P461 480 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 HAPLN4Q86UW8 402 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 TCTEX1D2Q8WW35 142 aa11.67□□□□□ -0.54
USB1-202ENST00000423271 ANKRD20A5PA0PJZ0 165 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 H3BUA1 57 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 FCGR3BO75015 233 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
USB1-202ENST00000423271 GNRHRP30968 328 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 ETV6P41212 452 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 UBE2KP61086 200 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 TNXAQ16473 311 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 PRSS8Q16651 343 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 VMA21Q3ZAQ7 101 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 SPANXN2Q5MJ10 180 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 AADACL3Q5VUY0 350 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 FAAP20Q6NZ36 180 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 ZNF66Q6ZN08 573 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 THAP7Q9BT49 309 aaPredicted RBP11.66□□□□□ -0.54
USB1-202ENST00000423271 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
USB1-202ENST00000423271 DYNC2H1Q8NCM8 4307 aaKnown RBP11.66□□□□□ -0.54
USB1-202ENST00000423271 C13orf42A0A1B0GVH6 325 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 RBMXL2O75526 392 aaKnown RBP11.65□□□□□ -0.54
USB1-202ENST00000423271 ZNF735P0CB33 412 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 AKAIN1P0CW23 69 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 SAA1P0DJI8 122 aaPredicted RBP11.65□□□□□ -0.54
USB1-202ENST00000423271 BRWD1-AS2P59051 145 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 LHFPL1Q86WI0 220 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 Q8N402 240 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 TEX45Q8NA69 505 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 OR4C16Q8NGL9 310 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 TRIM63Q969Q1 353 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 WWC2-AS2Q96NR7 200 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 PHB2Q99623 299 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
USB1-202ENST00000423271 MSGN1A6NI15 193 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 GPR31O00270 319 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 TRBV12-3P01733 135 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
USB1-202ENST00000423271 UCP3P55916 312 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 CATR1Q13166 79 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 MEF2DQ14814 521 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 SCGB2B2Q4G0G5 96 aa11.64□□□□□ -0.55
USB1-202ENST00000423271 C10orf55Q5SWW7 151 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms