RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 C15orf61A6NNL5 157 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 HNF4GQ14541 408 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 DMRTC2Q8IXT2 367 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-202ENST00000422785 C17orf112F2Z3M2 114 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 IFNA10P01566 189 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 CD1BP29016 333 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 UCNP55089 124 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
CDCA3-202ENST00000422785 POU2AF1Q16633 256 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 ZCCHC14Q8WYQ9 949 aaKnown RBP11.32□□□□□ -0.6
CDCA3-202ENST00000422785 LHX4Q969G2 390 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 P2RX4Q99571 388 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 NIPSNAP3BQ9BS92 247 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 TMEM106BQ9NUM4 274 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 TCF19Q9Y242 345 aa11.32□□□□□ -0.6
CDCA3-202ENST00000422785 TRGV8A0A0C4DH27 118 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 E7EQL1 145 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 GFRA3O60609 400 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 IFNA1P01562 189 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 RNF224P0DH78 156 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 RNF212Q495C1 297 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 CCL17Q92583 94 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 ISOC2Q96AB3 205 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 GSN-AS1Q9NRJ2 163 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 TNFRSF13BO14836 293 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-202ENST00000422785 HRASP01112 189 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 RAB13P51153 203 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-202ENST00000422785 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
CDCA3-202ENST00000422785 A0A1W2PPH5 198 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
CDCA3-202ENST00000422785 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
CDCA3-202ENST00000422785 MS4A5Q9H3V2 200 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 ROS1P08922 2347 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 A0A1W2PPE2 198 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 RRHO14718 337 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 FCN3O75636 299 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 CT45A6P0DMU7 189 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 CT45A5P0DMU8 189 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 CT45A7P0DMV0 189 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 CASP6P55212 293 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 RAB11AP62491 216 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 NHLH1Q02575 133 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 FAM90A2PQ658T7 463 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
CDCA3-202ENST00000422785 A0A087WWC5 75 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 PRSS46E5RG02 174 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 SOX15O60248 233 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 S100A6P06703 90 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
CDCA3-202ENST00000422785 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
CDCA3-202ENST00000422785 DLK1P80370 383 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 TMEM200BQ69YZ2 307 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 Q8N7P7 452 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-202ENST00000422785 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
CDCA3-202ENST00000422785 NDUFB3O43676 98 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 MPDU1O75352 247 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 APOBEC3AP31941 199 aaPredicted RBP11.29□□□□□ -0.6
CDCA3-202ENST00000422785 EFNB3Q15768 340 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 ZNF833PQ6ZTB9 187 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 SLC25A22Q9H936 323 aa11.29□□□□□ -0.6
CDCA3-202ENST00000422785 OR2C1O95371 312 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 CD3EP07766 207 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 IL6RP08887 468 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-202ENST00000422785 MAS1LP35410 378 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 ZNF124Q15973 351 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 LRRC10Q5BKY1 277 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 RAXQ9Y2V3 346 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 CYB5BO43169 146 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDCA3-202ENST00000422785 CCL3L1P16619 93 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 CA7P43166 264 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-202ENST00000422785 LYPD2Q6UXB3 125 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 FAM24BQ8N5W8 94 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 OR13D1Q8NGV5 346 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 PRNDQ9UKY0 176 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 B9A039 149 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms