RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SRSF8Q9BRL6 282 aaKnown RBP6.67□□□□□ -1.34
MDC1-204ENST00000422266 ZNF430Q9H8G1 570 aaPredicted RBP6.67□□□□□ -1.34
MDC1-204ENST00000422266 SIGLEC8Q9NYZ4 499 aa6.67□□□□□ -1.34
MDC1-204ENST00000422266 PEMTQ9UBM1 199 aa6.67□□□□□ -1.34
MDC1-204ENST00000422266 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
MDC1-204ENST00000422266 LSM4Q9Y4Z0 139 aaKnown RBP6.67□□□□□ -1.34
MDC1-204ENST00000422266 SORL1Q92673 2214 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 IGKV1D-13A0A0B4J2D9 117 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 NPIPB5A8MRT5 1133 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 HPRT1P00492 218 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 IGKV1-13P0DP09 117 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 NQO2P16083 231 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 HIST1H1BP16401 226 aaKnown RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 PRSS3P35030 304 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 RPL8P62917 257 aaKnown RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 ATP5G2Q06055 141 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 MZT2AQ6P582 158 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 DHRS11Q6UWP2 260 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 IDO2Q6ZQW0 420 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 HSD17B13Q7Z5P4 300 aaPredicted RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 SAMD12Q8N8I0 201 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 OR9G4Q8NGQ1 327 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 OR2K2Q8NGT1 345 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 TMEM167AQ8TBQ9 72 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 CASTOR1Q8WTX7 329 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 C15orf40Q8WUR7 153 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 WWC2-AS2Q96NR7 200 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 PRR25Q96S07 402 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 SLC5A7Q9GZV3 580 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 ALX4Q9H161 411 aaPredicted RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 BET1LQ9NYM9 111 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 TAS2R8Q9NYW2 309 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 THYN1Q9P016 225 aa6.66□□□□□ -1.34
MDC1-204ENST00000422266 CCDC59Q9P031 241 aaKnown RBP6.66□□□□□ -1.34
MDC1-204ENST00000422266 TRBV9A0A0B4J1U6 114 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 SULT1C2O00338 296 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 TPPPO94811 219 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 IGLV2-14P01704 120 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 APOA1P02647 267 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 GP9P14770 177 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 RORCP51449 518 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 ERVK-16P61578 105 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 RPL30P62888 115 aaKnown RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 SSBP2P81877 361 aaPredicted RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 RHOGP84095 191 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 EIF4EBP1Q13541 118 aaPredicted RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 DYRK1AQ13627 763 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 KLF5Q13887 457 aaPredicted RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 LCN12Q6JVE5 192 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 SPAG16Q8N0X2 631 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 PUSL1Q8N0Z8 303 aaKnown RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 CADM3Q8N126 398 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 GVQW1Q8N7I0 195 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 OR5H2Q8NGV7 314 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 OR6F1Q8NGZ6 308 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 CXorf58Q96LI9 332 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 SLIRPQ9GZT3 109 aaKnown RBP6.65□□□□□ -1.34
MDC1-204ENST00000422266 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 SCPEP1Q9HB40 452 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 HRASLSQ9HDD0 168 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 EHFQ9NZC4 300 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 PTTG2Q9NZH5 202 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 COMMD9Q9P000 198 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 ADAM30Q9UKF2 790 aa6.65□□□□□ -1.34
MDC1-204ENST00000422266 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 IGLV1-51P01701 117 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 ZNF735P0CB33 412 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 DEFA4P12838 97 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 SPNP16150 400 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 HLA-GP17693 338 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 NAT1P18440 290 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 TAS2R20P59543 309 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 FXYD4P59646 89 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 EXOSC2Q13868 293 aaKnown RBP6.64□□□□□ -1.35
MDC1-204ENST00000422266 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 OR2B11Q5JQS5 317 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 AADACL3Q5VUY0 350 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 GTSCR1Q86UQ5 136 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 TMEM17Q86X19 198 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 SGPP2Q8IWX5 399 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 Q8N402 240 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 DMBX1Q8NFW5 382 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 MOB3AQ96BX8 217 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 COMMD5Q9GZQ3 224 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 CCL28Q9NRJ3 127 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 FAM212BQ9NTI7 297 aaPredicted RBP6.64□□□□□ -1.35
MDC1-204ENST00000422266 FKBP11Q9NYL4 201 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 U3KQK5 164 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 TNCP24821 2201 aa6.64□□□□□ -1.35
MDC1-204ENST00000422266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.63□□□□□ -1.35
MDC1-204ENST00000422266 TRBV7-1A0A0A6YYK4 115 aa6.63□□□□□ -1.35
MDC1-204ENST00000422266 TNFSF12O43508 249 aa6.63□□□□□ -1.35
MDC1-204ENST00000422266 GGCTO75223 188 aaKnown RBP6.63□□□□□ -1.35
MDC1-204ENST00000422266 CRYGCP07315 174 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms