RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 DAPL1A0PJW8 107 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 J3QLW9 94 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 J3QRE1 110 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 OXTP01178 125 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 IL6RP08887 468 aaPredicted RBP6.33□□□□□ -1.4
TRIM39-206ENST00000420746 MGMTP16455 207 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF19P17023 458 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 HOXB6P17509 224 aaKnown RBP6.33□□□□□ -1.4
TRIM39-206ENST00000420746 LEMD1Q68G75 181 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 VN1R17PQ8TDU5 208 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 MRPL48Q96GC5 212 aaKnown RBP6.33□□□□□ -1.4
TRIM39-206ENST00000420746 ADTRPQ96IZ2 230 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 C4orf36Q96KX1 117 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF184Q99676 751 aaPredicted RBP6.33□□□□□ -1.4
TRIM39-206ENST00000420746 PDCD1LG2Q9BQ51 273 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 RHPN1-AS1Q9BWJ2 59 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 THYN1Q9P016 225 aa6.33□□□□□ -1.4
TRIM39-206ENST00000420746 TRBV6-6A0A0A6YYG2 114 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 IFNA5P01569 189 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 REG1AP05451 166 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 DEFA4P12838 97 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 AREGP15514 252 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 MAS1LP35410 378 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 RPL27AP46776 148 aaKnown RBP6.32□□□□□ -1.4
TRIM39-206ENST00000420746 CCL18P55774 89 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 HLA-DRB3P79483 266 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 GLIPR1L1Q6UWM5 242 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 SYS1Q8N2H4 156 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 TMEM116Q8NCL8 245 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 GPR148Q8TDV2 347 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 NRBF2Q96F24 287 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 CYYR1Q96J86 154 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 C20orf24Q9BUV8 137 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 Q9H3A6 140 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 RIMS4Q9H426 269 aaPredicted RBP6.32□□□□□ -1.4
TRIM39-206ENST00000420746 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 IMPAD1Q9NX62 359 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 DKK2Q9UBU2 259 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 LRP2P98164 4655 aa6.32□□□□□ -1.4
TRIM39-206ENST00000420746 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 HMGB1P1B2RPK0 211 aaPredicted RBP6.31□□□□□ -1.4
TRIM39-206ENST00000420746 EREGO14944 169 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 CRYZL1O95825 349 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
TRIM39-206ENST00000420746 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 DHFR2Q86XF0 187 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 GBGT1Q8N5D6 347 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 ACBD7Q8N6N7 88 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 VSTM2AQ8TAG5 236 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 OR10C1Q96KK4 312 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 NEDD4LQ96PU5 975 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 BANF2Q9H503 90 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 CLEC5AQ9NY25 188 aa6.31□□□□□ -1.4
TRIM39-206ENST00000420746 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRIM39-206ENST00000420746 IGKV3-7A0A075B6H7 116 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 OR2T8A6NH00 312 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 E7EUB6 86 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 CRTAPO75718 401 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-206ENST00000420746 IGFBP3P17936 291 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-206ENST00000420746 GNRHRP30968 328 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 FGF9P31371 208 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-206ENST00000420746 ALDH3B2P48448 385 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 SERPINB10P48595 397 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 DAPP51397 102 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 PSMD7P51665 324 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 ARFRP1Q13795 201 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 AWAT2Q6E213 333 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 CDH26Q8IXH8 852 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 ARHGAP24Q8N264 748 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 OR8J1Q8NGP2 316 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 MUL1Q969V5 352 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 GRAMD2BQ96HH9 432 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF414Q96IQ9 312 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 OR2D2Q9H210 308 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 OR51E2Q9H255 320 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 MS4A6AQ9H2W1 248 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 Q9H8V8 135 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 CHMP1AQ9HD42 196 aaPredicted RBP6.3□□□□□ -1.4
TRIM39-206ENST00000420746 RDH8Q9NYR8 311 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 LINC00588Q9Y4M8 146 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
TRIM39-206ENST00000420746 KRTAP9-6A0A140TA67 174 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 CYB5BO43169 146 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 KBTBD11O94819 623 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 HTN3P15516 51 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 GNB3P16520 340 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 DUTP33316 252 aaKnown RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 USF2Q15853 346 aaPredicted RBP6.29□□□□□ -1.4
TRIM39-206ENST00000420746 ATP6AP1Q15904 470 aa6.29□□□□□ -1.4
TRIM39-206ENST00000420746 SSX1Q16384 188 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms