RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FYTTD1Q96QD9 318 aaKnown RBP16.27■□□□□ 0.2
PTPN4-202ENST00000420482 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.26■□□□□ 0.19
PTPN4-202ENST00000420482 NPIPB5A8MRT5 1133 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 PPYP01298 95 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 CSN3P07498 182 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 C15orf32Q32M92 178 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 C10orf55Q5SWW7 151 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 IL34Q6ZMJ4 242 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 PUSL1Q8N0Z8 303 aaKnown RBP16.26■□□□□ 0.19
PTPN4-202ENST00000420482 Q8N1Y9 231 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 GVQW1Q8N7I0 195 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 OR4A5Q8NH83 315 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 MUC7Q8TAX7 377 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 S100A16Q96FQ6 103 aaKnown RBP16.26■□□□□ 0.19
PTPN4-202ENST00000420482 RNF167Q9H6Y7 350 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 AUNIPQ9H7T9 357 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 IFT46Q9NQC8 304 aa16.26■□□□□ 0.19
PTPN4-202ENST00000420482 OR2J3O76001 311 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 HIST1H1BP16401 226 aaKnown RBP16.25■□□□□ 0.19
PTPN4-202ENST00000420482 RPL8P62917 257 aaKnown RBP16.25■□□□□ 0.19
PTPN4-202ENST00000420482 ZNF45Q02386 682 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 EIF4EBP1Q13541 118 aaPredicted RBP16.25■□□□□ 0.19
PTPN4-202ENST00000420482 OR5AP2Q8NGF4 316 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 SLC5A7Q9GZV3 580 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 TUBA4BQ9H853 241 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 CCL28Q9NRJ3 127 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 SLC2A9Q9NRM0 540 aa16.25■□□□□ 0.19
PTPN4-202ENST00000420482 DYNC2H1Q8NCM8 4307 aaKnown RBP16.25■□□□□ 0.19
PTPN4-202ENST00000420482 DNAH7Q8WXX0 4024 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 HMX3A6NHT5 357 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 BMPR1BO00238 502 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 RBFOX2O43251 390 aaKnown RBP eCLIP16.24■□□□□ 0.197e-8■□□□□ 11.2
PTPN4-202ENST00000420482 TNFSF12O43508 249 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 RBMXL2O75526 392 aaKnown RBP16.24■□□□□ 0.19
PTPN4-202ENST00000420482 SSX9Q7RTT3 188 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 SPAG16Q8N0X2 631 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 CD300LFQ8TDQ1 290 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 TM2D3Q9BRN9 247 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 HRASLSQ9HDD0 168 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 C19orf73Q9NVV2 129 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 BET1LQ9NYM9 111 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 FBXL7Q9UJT9 491 aa16.24■□□□□ 0.19
PTPN4-202ENST00000420482 HUWE1Q7Z6Z7 4374 aaKnown RBP16.23■□□□□ 0.19
PTPN4-202ENST00000420482 TEX22C9J3V5 150 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 GGCTO75223 188 aaKnown RBP16.23■□□□□ 0.19
PTPN4-202ENST00000420482 ZNF735P0CB33 412 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 DEFA4P12838 97 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 FXYD4P59646 89 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 HERV-K104P61576 105 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 DYNLRB2Q8TF09 96 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 GIMAP1Q8WWP7 306 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 PALMDQ9NP74 551 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 ADAM30Q9UKF2 790 aa16.23■□□□□ 0.19
PTPN4-202ENST00000420482 XRCC3O43542 346 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 HPRT1P00492 218 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 IL6RP08887 468 aaPredicted RBP16.22■□□□□ 0.19
PTPN4-202ENST00000420482 NQO2P16083 231 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 HLA-GP17693 338 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 TAS2R31P59538 309 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 UBE2NLQ5JXB2 153 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 LAX1Q8IWV1 398 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 SPATA25Q9BR10 227 aa16.22■□□□□ 0.19
PTPN4-202ENST00000420482 TNCP24821 2201 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 SULT1C2O00338 296 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 CYB5BO43169 146 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 CRYGCP07315 174 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 LYL1P12980 280 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 PSMB6P28072 239 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 BRWD1-AS2P59051 145 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 OR4A47Q6IF82 309 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 EEF1AKMT3Q96AZ1 226 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 COMMD5Q9GZQ3 224 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 SLC2A8Q9NY64 477 aa16.21■□□□□ 0.19
PTPN4-202ENST00000420482 PTHLHP12272 177 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 TMEM69Q5SWH9 247 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 AADACL3Q5VUY0 350 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 TMEM17Q86X19 198 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 DMBX1Q8NFW5 382 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 CXorf58Q96LI9 332 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 CITED4Q96RK1 184 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 GPHA2Q96T91 129 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 TECRQ9NZ01 308 aaKnown RBP16.2■□□□□ 0.18
PTPN4-202ENST00000420482 EHFQ9NZC4 300 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 THYN1Q9P016 225 aa16.2■□□□□ 0.18
PTPN4-202ENST00000420482 A0A087WXM4 84 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 PPP5D1E7EU14 171 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 LGALS9O00182 355 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 IFNA6P05013 189 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 FCER2P06734 321 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 CTRB1P17538 263 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 ARL3P36405 182 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 ERVK-16P61578 105 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 FAM106AQ4KMX7 169 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 CASC10Q5T4H9 136 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 CTRB2Q6GPI1 263 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 ISOC1Q96CN7 298 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 SRSF8Q9BRL6 282 aaKnown RBP16.19■□□□□ 0.18
PTPN4-202ENST00000420482 PLEKHA2Q9HB19 425 aa16.19■□□□□ 0.18
PTPN4-202ENST00000420482 TRBV7-1A0A0A6YYK4 115 aa16.18■□□□□ 0.18
PTPN4-202ENST00000420482 MEIS3P1A6NDR6 274 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms