RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TREM1Q9NP99 234 aa16.99■□□□□ 0.31
GPC1-202ENST00000420138 hCG_1809904A0A1W2PP81 198 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 A0A1W2PPE2 198 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 A0A1W2PR64 198 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 A0A1W2PRV1 198 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 BUB1B-PAK6H3BSN5 160 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 COX7A1P24310 79 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 PRRX1P54821 245 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 BTN1A1Q13410 526 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 PDLIM3Q53GG5 364 aaPredicted RBP16.98■□□□□ 0.31
GPC1-202ENST00000420138 HAPLN4Q86UW8 402 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 STX12Q86Y82 276 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 TGIF2LXQ8IUE1 241 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.98■□□□□ 0.31
GPC1-202ENST00000420138 CAMLGP49069 296 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 SULT1A1P50225 295 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 PDLIM4P50479 330 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 TAGLNQ01995 201 aaKnown RBP16.98■□□□□ 0.31
GPC1-202ENST00000420138 ARL16Q0P5N6 197 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 TMEM267Q0VDI3 215 aaPredicted RBP16.98■□□□□ 0.31
GPC1-202ENST00000420138 TMEM177Q53S58 311 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 LDLRAD2Q5SZI1 272 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 HCP5Q6MZN7 132 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 ZNF429Q86V71 674 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 TMEM217Q8N7C4 229 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 DTD1Q8TEA8 209 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 TSNAXQ99598 290 aaKnown RBP16.98■□□□□ 0.31
GPC1-202ENST00000420138 PCGF1Q9BSM1 259 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 UQCC1Q9NVA1 299 aa16.98■□□□□ 0.31
GPC1-202ENST00000420138 LY6LH3BQJ8 138 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 RBMXL2O75526 392 aaKnown RBP16.97■□□□□ 0.31
GPC1-202ENST00000420138 HRASP01112 189 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 APOA2P02652 100 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 ATP5J2P56134 94 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 SPINK9Q5DT21 86 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 C10orf91Q5T1B1 145 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 TMEM14EPQ6UXP3 125 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 PNKDQ8N490 385 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 OR52E5Q8NH55 327 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 OR4A16Q8NH70 328 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 SIRT7Q9NRC8 400 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 TACC2O95359 2948 aa16.97■□□□□ 0.31
GPC1-202ENST00000420138 HELZ2Q9BYK8 2649 aaKnown RBP16.96■□□□□ 0.31
GPC1-202ENST00000420138 C15orf61A6NNL5 157 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 TRIM77I1YAP6 450 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 PRH1P02810 166 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 PRTN3P24158 256 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 IL3RAP26951 378 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 ATP6V0CP27449 155 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 ATRAIDQ6UW56 229 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 C1orf122Q6ZSJ8 110 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 COMMD1Q8N668 190 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 OR11H6Q8NGC7 330 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 OSR1Q8TAX0 266 aaPredicted RBP16.96■□□□□ 0.31
GPC1-202ENST00000420138 OR4C12Q96R67 309 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 ATP5SQ99766 215 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 TMEM231Q9H6L2 316 aa16.96■□□□□ 0.31
GPC1-202ENST00000420138 F8W036 122 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 RNASEK-C17orf49H0YIS7 233 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 DFFBO76075 338 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 TSPAN15O95858 294 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 METTL15P1P0C7V9 234 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 SPANXN5Q5MJ07 72 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 PDPNQ86YL7 162 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 OR2G3Q8NGZ4 309 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 TMEM14BQ9NUH8 114 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 FAM96BQ9Y3D0 163 aa16.96■□□□□ 0.3
GPC1-202ENST00000420138 H7C2Y5 167 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 ADCYAP1P18509 176 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 SPCS3P61009 180 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 LCN2P80188 198 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 ZNF616Q08AN1 781 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 TMEM182Q6ZP80 229 aaPredicted RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 PUSL1Q8N0Z8 303 aaKnown RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 KIR3DL3Q8N743 410 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 LHX4Q969G2 390 aa16.95■□□□□ 0.3
GPC1-202ENST00000420138 GNPNAT1Q96EK6 184 aaPredicted RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 UNKLQ9H9P5 680 aaKnown RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 FOXA2Q9Y261 457 aaPredicted RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 CARHSP1Q9Y2V2 147 aaKnown RBP16.95■□□□□ 0.3
GPC1-202ENST00000420138 PMS2P5A8MQ11 134 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 VWC2LB2RUY7 222 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 AGPAT2O15120 278 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 CD5P06127 495 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 SAA1P0DJI8 122 aaPredicted RBP16.94■□□□□ 0.3
GPC1-202ENST00000420138 SVBPQ8N300 66 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 C10orf105Q8TEF2 133 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 FLYWCH2Q96CP2 140 aaKnown RBP16.94■□□□□ 0.3
GPC1-202ENST00000420138 PERPQ96FX8 193 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 SEC11CQ9BY50 192 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 WASHC3Q9Y3C0 194 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 CELSR2Q9HCU4 2923 aa16.94■□□□□ 0.3
GPC1-202ENST00000420138 CEBPZOSA8MTT3 80 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 UMAD1C9J7I0 102 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 UPK2O00526 184 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 ENSAO43768 121 aaKnown RBP16.93■□□□□ 0.3
GPC1-202ENST00000420138 IFNA17P01571 189 aa16.93■□□□□ 0.3
GPC1-202ENST00000420138 VDAC2P45880 294 aaPredicted RBP16.93■□□□□ 0.3
GPC1-202ENST00000420138 DVL1P1P54792 670 aaPredicted RBP16.93■□□□□ 0.3
GPC1-202ENST00000420138 KLRD1Q13241 179 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms