RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 E7EQL1 145 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 IL6RP08887 468 aaPredicted RBP11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 IL3RAP26951 378 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OPRK1P41145 380 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PSMB3P49720 205 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PPOXP50336 477 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CCL20P78556 96 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RAB31Q13636 194 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 HAGHQ16775 308 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 LHX4Q969G2 390 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TVP23CQ96ET8 276 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RARRES2Q99969 163 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SLC35D1Q9NTN3 355 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 POLEQ07864 2286 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SMCO3A2RU48 225 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR13C7P0DN81 318 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MAS1LP35410 378 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ETV3LQ6ZN32 361 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PDPNQ86YL7 162 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ZNF383Q8NA42 475 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SLC24A4Q8NFF2 622 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
HLA-DPA1-242ENST00000419277 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RAB5BP61020 215 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ZNF726P1Q15940 193 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 FFAR4Q5NUL3 377 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR5AN1Q8NGI8 311 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR10G9Q8NGN4 311 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR10G7Q8NGN6 311 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CCL17Q92583 94 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
HLA-DPA1-242ENST00000419277 COLCA2A8K830 154 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 H3BQ15 152 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SNRNP70P08621 437 aaKnown RBP11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 NPY1RP25929 384 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ELLP55199 621 aaPredicted RBP11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TMEM177Q53S58 311 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 DUX4L9Q6RFH8 374 aaPredicted RBP11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR4C13Q8NGP0 309 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RXFP4Q8TDU9 374 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ZCCHC14Q8WYQ9 949 aaKnown RBP11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PLEKHA3Q9HB20 300 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 NPVFQ9HCQ7 196 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RFNGQ9Y644 331 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ICE1Q9Y2F5 2266 aa11.92□□□□□ -0.5
HLA-DPA1-242ENST00000419277 A0A1B0GV50 99 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 USF1P22415 310 aaPredicted RBP11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MC5RP33032 325 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 LCN15Q6UWW0 184 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 RAXQ9Y2V3 346 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 SPTBN2O15020 2390 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MED19A0JLT2 244 aaPredicted RBP11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ZFP92A6NM28 416 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 UPK2O00526 184 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 GNG10P50151 68 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MUC15Q8N387 334 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR10X1Q8NGY0 326 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 NANPQ8TBE9 248 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 VSIRQ9H7M9 311 aa11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DPA1-242ENST00000419277 PCNX1Q96RV3 2341 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CCL21O00585 134 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 DVL1O14640 695 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 KBTBD11O94819 623 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 IFNA4P05014 189 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 LOXP28300 417 aaPredicted RBP11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 LINC00205P59089 165 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TEPPQ6URK8 271 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 CA5BP1Q8WTZ4 195 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 BIN3Q9NQY0 253 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 OR51B2Q9Y5P1 312 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
HLA-DPA1-242ENST00000419277 BSNQ9UPA5 3926 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms