RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CHST1O43916 411 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 MSMBP08118 114 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 FGF2P09038 288 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 UBE2E1P51965 193 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 TNFRSF9Q07011 255 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 OR4A47Q6IF82 309 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 HSD17B13Q7Z5P4 300 aaPredicted RBP16.78■□□□□ 0.28
CASC3-203ENST00000418132 A0A1W2PPI3 338 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 B4DSR2 109 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 TMEM50AO95807 157 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 IL6RP08887 468 aaPredicted RBP16.78■□□□□ 0.28
CASC3-203ENST00000418132 RELBQ01201 579 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 LHFPL4Q7Z7J7 247 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 TMED6Q8WW62 240 aa16.78■□□□□ 0.28
CASC3-203ENST00000418132 Q5PR19 223 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 MINOS1Q5TGZ0 78 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 RPL7L1Q6DKI1 246 aaKnown RBP16.77■□□□□ 0.28
CASC3-203ENST00000418132 PRSS57Q6UWY2 283 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 EIF4E3Q8N5X7 224 aaKnown RBP16.77■□□□□ 0.28
CASC3-203ENST00000418132 HARBI1Q96MB7 349 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 RAB40CQ96S21 281 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 MINOS1-NBL1R4GNA1 71 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 VPS13CQ709C8 3753 aa16.77■□□□□ 0.28
CASC3-203ENST00000418132 PAX9P55771 341 aa16.77■□□□□ 0.27
CASC3-203ENST00000418132 LOXL1Q08397 574 aaPredicted RBP16.77■□□□□ 0.27
CASC3-203ENST00000418132 GPR157Q5UAW9 335 aa16.77■□□□□ 0.27
CASC3-203ENST00000418132 MOB3BQ86TA1 216 aa16.77■□□□□ 0.27
CASC3-203ENST00000418132 LINC00052Q96N35 136 aa16.77■□□□□ 0.27
CASC3-203ENST00000418132 UNC79Q9P2D8 2635 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 IGHV3-72A0A0B4J1Y9 119 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 TRAV3A0A0B4J244 114 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 A0A1W2PRD5 423 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 A0A1W2PRF3 423 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 A0A1W2PRM7 423 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 FGF16O43320 207 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 RBMXL2O75526 392 aaKnown RBP16.76■□□□□ 0.27
CASC3-203ENST00000418132 UBE2KP61086 200 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 VAMP2P63027 116 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 ZNF429Q86V71 674 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 OR2C3Q8N628 320 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 OR4A16Q8NH70 328 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 LRRC20Q8TCA0 184 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 QTRT1Q9BXR0 403 aaKnown RBP16.76■□□□□ 0.27
CASC3-203ENST00000418132 MS4A7Q9GZW8 240 aaPredicted RBP16.76■□□□□ 0.27
CASC3-203ENST00000418132 LYRM2Q9NU23 88 aaPredicted RBP16.76■□□□□ 0.27
CASC3-203ENST00000418132 BET1LQ9NYM9 111 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 FBXL17Q9UF56 701 aa16.76■□□□□ 0.27
CASC3-203ENST00000418132 FASNP49327 2511 aaKnown RBP16.76■□□□□ 0.27
CASC3-203ENST00000418132 MED6O75586 246 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 OR2B8PP59922 312 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 PUSL1Q8N0Z8 303 aaKnown RBP16.75■□□□□ 0.27
CASC3-203ENST00000418132 RBKSQ9H477 322 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 TBL2Q9Y4P3 447 aaKnown RBP16.75■□□□□ 0.27
CASC3-203ENST00000418132 WSB1Q9Y6I7 421 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 OOSP1A8MZH6 123 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 GPR137BO60478 399 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 SAA1P0DJI8 122 aaPredicted RBP16.75■□□□□ 0.27
CASC3-203ENST00000418132 ZP3P21754 424 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 LGALS4P56470 323 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 RPS16P62249 146 aaKnown RBP16.75■□□□□ 0.27
CASC3-203ENST00000418132 HABP2Q14520 560 aaPredicted RBP16.75■□□□□ 0.27
CASC3-203ENST00000418132 CLEC9AQ6UXN8 241 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 KRTAP1-3Q8IUG1 177 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 RNF141Q8WVD5 230 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 SMIM3Q9BZL3 60 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 CACFD1Q9UGQ2 172 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 HILPDAQ9Y5L2 63 aa16.75■□□□□ 0.27
CASC3-203ENST00000418132 C15orf61A6NNL5 157 aa16.74■□□□□ 0.27
CASC3-203ENST00000418132 FAM157CP0CG43 387 aa16.74■□□□□ 0.27
CASC3-203ENST00000418132 LGALS7P47929 136 aa16.74■□□□□ 0.27
CASC3-203ENST00000418132 PDLIM3Q53GG5 364 aaPredicted RBP16.74■□□□□ 0.27
CASC3-203ENST00000418132 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
CASC3-203ENST00000418132 TMEM14BQ9NUH8 114 aa16.74■□□□□ 0.27
CASC3-203ENST00000418132 UPK2O00526 184 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 TIMM23O14925 209 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 IGLV2-23P01705 113 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 CAV2P51636 162 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 TAS2R30P59541 319 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 EIF5AP63241 154 aaKnown RBP16.73■□□□□ 0.27
CASC3-203ENST00000418132 CFHR4Q92496 578 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 BSCL2Q96G97 398 aaPredicted RBP16.73■□□□□ 0.27
CASC3-203ENST00000418132 SMIM8Q96KF7 97 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 FOXA2Q9Y261 457 aaPredicted RBP16.73■□□□□ 0.27
CASC3-203ENST00000418132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.73■□□□□ 0.271e-8■■■■■ 30.2
CASC3-203ENST00000418132 TRAV20A0A0B4J274 112 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 FAM24AA6NFZ4 105 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 CD1BP29016 333 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 RPL23AP62750 156 aaKnown RBP16.73■□□□□ 0.27
CASC3-203ENST00000418132 CCDC144NLQ6NUI1 221 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 TMEM252Q8N6L7 170 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 OR1S2Q8NGQ3 325 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 RITA1Q96K30 269 aa16.73■□□□□ 0.27
CASC3-203ENST00000418132 NBPF19A0A087WUL8 3843 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 CENPVL3A0A0U1RRI6 287 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 KRBOX1C9JBD0 128 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 RNF223E7ERA6 249 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 JTBO76095 146 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 IAPPP10997 89 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 GATA3P23771 443 aa16.72■□□□□ 0.27
CASC3-203ENST00000418132 SPCS3P61009 180 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms