RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 RBFOX2O43251 390 aaKnown RBP eCLIP5.4□□□□□ -1.54
NCL-203ENST00000417652 GSTZ1O43708 216 aaPredicted RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 RAMP3O60896 148 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 RBMXL2O75526 392 aaKnown RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 ATG12O94817 140 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 S1PR2O95136 353 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 KRASP01116 189 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 IGHG4P01861 327 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 APELAP0DMC3 54 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 PI3P19957 117 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 F2RP25116 425 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.546e-28■□□□□ 8.9
NCL-203ENST00000417652 SLC6A1P30531 599 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 ECI1P42126 302 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 RAB9AP51151 201 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 UCP3P55916 312 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 TPPP2P59282 170 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 TAS2R31P59538 309 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 RPL8P62917 257 aaKnown RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 TCTEX1D4Q5JR98 221 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 TRIQKQ629K1 86 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 C8orf86Q6ZUL3 223 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 TBC1D26Q86UD7 250 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 SLC25A42Q86VD7 318 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 OR4D10Q8NGI6 311 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 OR5M8Q8NGP6 311 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 OR4A5Q8NH83 315 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 RNASE11Q8TAA1 199 aaKnown RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 MARCH1Q8TCQ1 289 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 WIPF2Q8TF74 440 aaPredicted RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 DPF1Q92782 380 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 ZNF486Q96H40 463 aaPredicted RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 TMEM68Q96MH6 324 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 OR5B12Q96R08 314 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 RSRP1Q9BUV0 290 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 HINT2Q9BX68 163 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 COMMD5Q9GZQ3 224 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 FXYD6Q9H0Q3 95 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 ZNF430Q9H8G1 570 aaPredicted RBP5.4□□□□□ -1.54
NCL-203ENST00000417652 PLEKHA2Q9HB19 425 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 VSIG4Q9Y279 399 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 NUBP2Q9Y5Y2 271 aa5.4□□□□□ -1.54
NCL-203ENST00000417652 NOTCH3Q9UM47 2321 aa5.4□□□□□ -1.55
NCL-203ENST00000417652 A0A0G2JLM5 398 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 CCL24O00175 119 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 ARPC1BO15143 372 aaKnown RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 KBTBD11O94819 623 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 DHFRP00374 187 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 TRGV3P03979 118 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 CD74P04233 296 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 CRYGBP07316 175 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 DEFA4P12838 97 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 HLA-GP17693 338 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 MAS1LP35410 378 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 MYCNOSP40205 109 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 RPL27AP46776 148 aaKnown RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 CDX1P47902 265 aaPredicted RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 MECP2P51608 486 aaKnown RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 PIGPP57054 158 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 NDPQ00604 133 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 EIF4EBP1Q13541 118 aaPredicted RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 TRIM16LQ309B1 348 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 FAAP20Q6NZ36 180 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 H2BFWTQ7Z2G1 175 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 MINDY2Q8NBR6 621 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR51S1Q8NGJ8 323 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR4C16Q8NGL9 310 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR6Q1Q8NGQ2 317 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR13C8Q8NGS7 320 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 OR4A16Q8NH70 328 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 CASTOR1Q8WTX7 329 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
NCL-203ENST00000417652 UBE2E2Q96LR5 201 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 KLK15Q9H2R5 256 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 SLA2Q9H6Q3 261 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 SLC2A9Q9NRM0 540 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 COMMD9Q9P000 198 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 ZNF580Q9UK33 172 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 KCNIP3Q9Y2W7 256 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 FBXO7Q9Y3I1 522 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 VWFP04275 2813 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 ANK2Q01484 3957 aa5.39□□□□□ -1.55
NCL-203ENST00000417652 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 C3orf85A0A1B0GTC6 90 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 LINC00854A0A1B0GVQ3 168 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 ANKRD20A5PA0PJZ0 165 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 MARCH11A6NNE9 402 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 CENPXA8MT69 81 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 UPK2O00526 184 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 CYB5BO43169 146 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 IGHV3-11P01762 117 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 CTSDP07339 412 aaPredicted RBP5.38□□□□□ -1.55
NCL-203ENST00000417652 OR9G9P0C7N8 305 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 EGR2P11161 476 aaPredicted RBP5.38□□□□□ -1.55
NCL-203ENST00000417652 PSMB8P28062 276 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 PPIFP30405 207 aaKnown RBP5.38□□□□□ -1.55
NCL-203ENST00000417652 G6PCP35575 357 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 AKR1C2P52895 323 aa5.38□□□□□ -1.55
NCL-203ENST00000417652 CCDC190Q86UF4 302 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms