RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FOXRED2Q8IWF2 684 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 OR4C16Q8NGL9 310 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 RNF5Q99942 180 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 OR51J1Q9H342 316 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 HERC2O95714 4834 aa13.93□□□□□ -0.18
VCP-202ENST00000417448 SEC14L6B5MCN3 397 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 AP4M1O00189 453 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 ARPC1BO15143 372 aaKnown RBP13.92□□□□□ -0.18
VCP-202ENST00000417448 EGR2P11161 476 aaPredicted RBP13.92□□□□□ -0.18
VCP-202ENST00000417448 PGAM2P15259 253 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 CNPY1Q3B7I2 92 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 SPAG16Q8N0X2 631 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 ZBTB34Q8NCN2 500 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 OR5M8Q8NGP6 311 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 CASTOR1Q8WTX7 329 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 RSRP1Q9BUV0 290 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 EDA2RQ9HAV5 297 aa13.92□□□□□ -0.18
VCP-202ENST00000417448 ANKRD20A5PA0PJZ0 165 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 GPR31O00270 319 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 AKAIN1P0CW23 69 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 SAA1P0DJI8 122 aaPredicted RBP13.91□□□□□ -0.18
VCP-202ENST00000417448 LGALS7P47929 136 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 SSBP2P81877 361 aaPredicted RBP13.91□□□□□ -0.18
VCP-202ENST00000417448 ECSCRQ19T08 205 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 LHFPL1Q86WI0 220 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 Q8N402 240 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 MARCH1Q8TCQ1 289 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 CHPT1Q8WUD6 406 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 MRGPRFQ96AM1 343 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 RABL2AQ9UBK7 228 aaPredicted RBP13.91□□□□□ -0.18
VCP-202ENST00000417448 RABL2BQ9UNT1 228 aa13.91□□□□□ -0.18
VCP-202ENST00000417448 ALMS1Q8TCU4 4167 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 FRMD6-AS1P0C7T7 363 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 APELAP0DMC3 54 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 SSBP1Q04837 148 aaKnown RBP13.9□□□□□ -0.18
VCP-202ENST00000417448 MSMO1Q15800 293 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 SPANXN2Q5MJ10 180 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 OR4S2Q8NH73 311 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 GRPEL2Q8TAA5 225 aa13.9□□□□□ -0.18
VCP-202ENST00000417448 S1PR2O95136 353 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 SPDEFO95238 335 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 CNIH1O95406 144 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 MYOD1P15172 320 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 TBPP20226 339 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 LPAR6P43657 344 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 UBE2KP61086 200 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 CATR1Q13166 79 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 FXYD3Q14802 87 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 VMA21Q3ZAQ7 101 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 TBC1D26Q86UD7 250 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 ARRDC1Q8N5I2 433 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 OR51S1Q8NGJ8 323 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 OSR1Q8TAX0 266 aaPredicted RBP13.89□□□□□ -0.19
VCP-202ENST00000417448 TRIM63Q969Q1 353 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 SRRQ9GZT4 340 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 MCUBQ9NWR8 336 aa13.89□□□□□ -0.19
VCP-202ENST00000417448 TRAV3A0A0B4J244 114 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 TRAV41A0A0B4J266 112 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 LINC00854A0A1B0GVQ3 168 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 DISC1C4P0D8 188 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 LY86O95711 162 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 IGF1P05019 195 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 RPLP1P05386 114 aaKnown RBP13.88□□□□□ -0.19
VCP-202ENST00000417448 VDAC1P21796 283 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 UCP3P55916 312 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 TNXAQ16473 311 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 BAK1Q16611 211 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 C10orf55Q5SWW7 151 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 CMTM1Q8IZ96 169 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 SLC38A6Q8IZM9 456 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 LFNGQ8NES3 379 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 SDHCQ99643 169 aaPredicted RBP13.88□□□□□ -0.19
VCP-202ENST00000417448 KLK15Q9H2R5 256 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 ZMAT4Q9H898 229 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
VCP-202ENST00000417448 PCLOQ9Y6V0 5065 aa13.88□□□□□ -0.19
VCP-202ENST00000417448 ETV6P41212 452 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 KIR2DS2P43631 304 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 SLC35B1P78383 322 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 CFHR3Q02985 330 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 KLF9Q13886 244 aaPredicted RBP13.87□□□□□ -0.19
VCP-202ENST00000417448 MEF2DQ14814 521 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 PRSS8Q16651 343 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 ZNF585BQ52M93 769 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 UNQ5815/PRO19632Q6UWF5 114 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 ZNF562Q6V9R5 426 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 TEX45Q8NA69 505 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 ARPC1AQ92747 370 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 HRASLSQ9HDD0 168 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 SLC2A9Q9NRM0 540 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
VCP-202ENST00000417448 SOX15O60248 233 aa13.86□□□□□ -0.19
VCP-202ENST00000417448 PPIFP30405 207 aaKnown RBP13.86□□□□□ -0.19
VCP-202ENST00000417448 PIGPP57054 158 aa13.86□□□□□ -0.19
VCP-202ENST00000417448 LPCAT3Q6P1A2 487 aa13.86□□□□□ -0.19
VCP-202ENST00000417448 PUSL1Q8N0Z8 303 aaKnown RBP13.86□□□□□ -0.19
VCP-202ENST00000417448 COMMD1Q8N668 190 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms