RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CD40LGP29965 261 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 PPIFP30405 207 aaKnown RBP18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 LPAR6P43657 344 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 PIGPP57054 158 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 ERVK-16P61578 105 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 KLF9Q13886 244 aaPredicted RBP18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 HIST2H2BDQ6DRA6 164 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 SSX9Q7RTT3 188 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 MINDY2Q8NBR6 621 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 DMBX1Q8NFW5 382 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 OR13C8Q8NGS7 320 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 TMEM167AQ8TBQ9 72 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 ZNF430Q9H8G1 570 aaPredicted RBP18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 FBXO7Q9Y3I1 522 aa18.11■□□□□ 0.49
SMARCB1-205ENST00000417137 PI3P19957 117 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 MAS1LP35410 378 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 POU2AF1Q16633 256 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 TRIQKQ629K1 86 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 LFNGQ8NES3 379 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 OR4F17Q8NGA8 305 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 OR4F4Q96R69 305 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 FAM103A1Q9BTL3 118 aaKnown RBP18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 HRASLSQ9HDD0 168 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 BET1LQ9NYM9 111 aa18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 FOXA2Q9Y261 457 aaPredicted RBP18.1■□□□□ 0.49
SMARCB1-205ENST00000417137 A0A1W2PRX2 142 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 S1PR2O95136 353 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 SERPINE2P07093 398 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 MRGPRG-AS1Q2M3A8 158 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 ZNF57Q68EA5 555 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 OR4A47Q6IF82 309 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 RNF152Q8N8N0 203 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 OR5M8Q8NGP6 311 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 R3HDM4Q96D70 268 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 PHB2Q99623 299 aa18.09■□□□□ 0.49
SMARCB1-205ENST00000417137 A0A1W2PN81 502 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 B3GALNT1O75752 331 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 IGLV1-40P01703 118 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 PSMB8P28062 276 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 SLC6A1P30531 599 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 CHRNA7P36544 502 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 RPL23AP62750 156 aaKnown RBP18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 ZNF585BQ52M93 769 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 C19orf54Q5BKX5 351 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 GPR132Q9UNW8 380 aa18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 TET2Q6N021 2002 aaPredicted RBP18.08■□□□□ 0.48
SMARCB1-205ENST00000417137 MSGN1A6NI15 193 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 ADARB2-AS1A8MUL3 147 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 PF4V1P10720 104 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 RPA2P15927 270 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 RPL8P62917 257 aaKnown RBP18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 SSBP2P81877 361 aaPredicted RBP18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 TREML4Q6UXN2 200 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 CADM3Q8N126 398 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 SRSF12Q8WXF0 261 aaKnown RBP18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 MRGPRFQ96AM1 343 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 SPIN2AQ99865 258 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 SPIN2BQ9BPZ2 258 aa18.07■□□□□ 0.48
SMARCB1-205ENST00000417137 C3orf85A0A1B0GTC6 90 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 MARCH11A6NNE9 402 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 H0Y980 276 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 KRASP01116 189 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 RPLP1P05386 114 aaKnown RBP18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 BAK1Q16611 211 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 FAM110DQ8TAY7 271 aaPredicted RBP18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 RTBDNQ9BSG5 229 aaPredicted RBP18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 TMEM140Q9NV12 185 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 PTTG2Q9NZH5 202 aa18.06■□□□□ 0.48
SMARCB1-205ENST00000417137 TEX13DA0A0J9YY54 714 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 NUDT19A8MXV4 375 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 UPK2O00526 184 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 ATG12O94817 140 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 TSPAN15O95858 294 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 FGF2P09038 288 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 HLA-GP17693 338 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 CDX1P47902 265 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 RAB9AP51151 201 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 S100ZQ8WXG8 99 aa18.05■□□□□ 0.48
SMARCB1-205ENST00000417137 SNAPC5O75971 98 aa18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 IL6RP08887 468 aaPredicted RBP18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 G6PCP35575 357 aa18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 RPL27AP46776 148 aaKnown RBP18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 ZNF695Q8IW36 515 aa18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 C5orf66Q9H5L9 145 aa18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 ZNF355PQ9NSJ1 428 aa18.04■□□□□ 0.48
SMARCB1-205ENST00000417137 NAP1L6A6NFF2 107 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 CENPXA8MT69 81 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 H3BUA1 57 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 LCNL1Q6ZST4 164 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 OR5T1Q8NG75 326 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 TP53RKQ96S44 253 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 TSC22D3Q99576 134 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 SDHCQ99643 169 aaPredicted RBP18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 SLC25A21Q9BQT8 299 aaPredicted RBP18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 COMMD5Q9GZQ3 224 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 KLK15Q9H2R5 256 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 SLA2Q9H6Q3 261 aa18.03■□□□□ 0.48
SMARCB1-205ENST00000417137 SOX15O60248 233 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 TRIM16LQ309B1 348 aa18.02■□□□□ 0.48
SMARCB1-205ENST00000417137 H2BFWTQ7Z2G1 175 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms