RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 LY6G6FQ5SQ64 297 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 C10orf55Q5SWW7 151 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
LINC01238-201ENST00000416204 BTNL8Q6UX41 500 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 PDPNQ86YL7 162 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 THRSPQ92748 146 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 PGLYRP3Q96LB9 341 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 NEDD4LQ96PU5 975 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 RNF5Q99942 180 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 NICN1Q9BSH3 213 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 SRRQ9GZT4 340 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 RABL2AQ9UBK7 228 aaPredicted RBP6.95□□□□□ -1.3
LINC01238-201ENST00000416204 CKLFQ9UBR5 152 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 RABL2BQ9UNT1 228 aa6.95□□□□□ -1.3
LINC01238-201ENST00000416204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.94□□□□□ -1.3
LINC01238-201ENST00000416204 TRBV5-5A0A0J9YX44 114 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 DEFB4AO15263 64 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 GLAP06280 429 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 SCTP09683 121 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 CD3GP09693 182 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 CLEC2LP0C7M8 214 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 FCGR2BP31994 310 aaPredicted RBP6.94□□□□□ -1.3
LINC01238-201ENST00000416204 C15orf32Q32M92 178 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 CEACAM19Q7Z692 300 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 DIRAS2Q96HU8 199 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 CMTM3Q96MX0 182 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 SDHCQ99643 169 aaPredicted RBP6.94□□□□□ -1.3
LINC01238-201ENST00000416204 SOSTQ9BQB4 213 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 MIXL1Q9H2W2 232 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 TECRQ9NZ01 308 aaKnown RBP6.94□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF221Q9UK13 617 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 DMRT1Q9Y5R6 373 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 V9GYH0 126 aa6.94□□□□□ -1.3
LINC01238-201ENST00000416204 IGHV3-35A0A0C4DH35 117 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 HMX3A6NHT5 357 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 FAM90A7PA6NKC0 464 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 PDCD5O14737 125 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 SHOXO15266 292 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 S1PR2O95136 353 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 HNRNPCP07910 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC01238-201ENST00000416204 UCHL1P09936 223 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 MAPK3P27361 379 aaPredicted RBP6.93□□□□□ -1.3
LINC01238-201ENST00000416204 HTR2CP28335 458 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 APOC4P55056 127 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 RPS11P62280 158 aaKnown RBP eCLIP6.93□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF79Q15937 498 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 Q499Y3 187 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 ACSM3Q53FZ2 586 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 YIF1BQ5BJH7 314 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 CHAC2Q8WUX2 184 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
LINC01238-201ENST00000416204 RNF183Q96D59 192 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 AK3Q9UIJ7 227 aa6.93□□□□□ -1.3
LINC01238-201ENST00000416204 TRBV5-7A0A0A0MS05 114 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 A0A0A6YYD4 124 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 TRBV9A0A0B4J1U6 114 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 IGKV1-6A0A0C4DH72 117 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 NOTOA8MTQ0 251 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 GGCTO75223 188 aaKnown RBP6.92□□□□□ -1.3
LINC01238-201ENST00000416204 NAPSAO96009 420 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 HLA-DQB1P01920 261 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 MED14OSP0DP75 135 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 RAB3BP20337 219 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 ZBTB25P24278 435 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 ARL3P36405 182 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 TALDO1P37837 337 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 PSMD7P51665 324 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 HLA-DRB3P79483 266 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 ASAH1Q13510 395 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 PRSS8Q16651 343 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 HACD4Q5VWC8 232 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 SFXN4Q6P4A7 337 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF880Q6PDB4 577 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 UNQ9165/PRO28630Q6UXU0 137 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 Q6ZWC4 215 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 SNX29P2Q8IUI4 249 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 FAM223AQ8IWN6 122 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 OR1L6Q8NGR2 347 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 TMEM68Q96MH6 324 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 RHBDL2Q9NX52 303 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 RDH8Q9NYR8 311 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 COMMD3Q9UBI1 195 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 FBXL7Q9UJT9 491 aa6.92□□□□□ -1.3
LINC01238-201ENST00000416204 IGLL5B9A064 214 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 IFNA4P05014 189 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 IL7P13232 177 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 INSL4Q14641 139 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 RBMS2Q15434 407 aaKnown RBP6.91□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF124Q15973 351 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF585BQ52M93 769 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms