RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 RELBQ01201 579 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 HNF4GQ14541 408 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 SMCO1Q147U7 214 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 IAH1Q2TAA2 248 aaPredicted RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 FOXRED2Q8IWF2 684 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 ZBTB8BQ8NAP8 495 aaPredicted RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 RNASE11Q8TAA1 199 aaKnown RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 NMES1Q9C002 83 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 GSX1Q9H4S2 264 aaPredicted RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
SF3B1-204ENST00000414963 C1RLQ9NZP8 487 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 CACNG5Q9UF02 275 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 CACFD1Q9UGQ2 172 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 TCF19Q9Y242 345 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
SF3B1-204ENST00000414963 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 H3BUX3 64 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 SLC25A17O43808 307 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 SNAPC5O75971 98 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 KBTBD11O94819 623 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 OR2F2O95006 317 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 OR9G9P0C7N8 305 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 CNTFRP26992 372 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 MMDQ15546 238 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 IZUMO4Q1ZYL8 232 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 MRGPRG-AS1Q2M3A8 158 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 THOC7Q6I9Y2 204 aaKnown RBP11.37□□□□□ -0.59
SF3B1-204ENST00000414963 ZNF429Q86V71 674 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 TMEM86BQ8N661 226 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 OR4D5Q8NGN0 318 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 SSMEM1Q8WWF3 244 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 FYTTD1Q96QD9 318 aaKnown RBP11.37□□□□□ -0.59
SF3B1-204ENST00000414963 RANBP3Q9H6Z4 567 aaPredicted RBP11.37□□□□□ -0.59
SF3B1-204ENST00000414963 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 PITPNC1Q9UKF7 332 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 SVEP1Q4LDE5 3571 aa11.37□□□□□ -0.59
SF3B1-204ENST00000414963 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 FAM90A26D6RGX4 464 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 RAP2BP61225 183 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 PRSS8Q16651 343 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
SF3B1-204ENST00000414963 C16orf82Q7Z2V1 217 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 FAM71E2Q8N5Q1 922 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 FKBP11Q9NYL4 201 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 METTL1Q9UBP6 276 aaKnown RBP11.36□□□□□ -0.59
SF3B1-204ENST00000414963 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
SF3B1-204ENST00000414963 POMT1Q9Y6A1 747 aa11.36□□□□□ -0.59
SF3B1-204ENST00000414963 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 FGF16O43320 207 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 CCNKO75909 580 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 IGHV4-59P01825 116 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 SRD5A1P18405 259 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 MAS1LP35410 378 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 RPL8P62917 257 aaKnown RBP11.35□□□□□ -0.59
SF3B1-204ENST00000414963 CD83Q01151 205 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 ID3Q02535 119 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 AKAP14Q86UN6 197 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 MMD2Q8IY49 270 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 SIGLECL1Q8N7X8 197 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 Q8N9W7 124 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 OR52E5Q8NH55 327 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 OR4A16Q8NH70 328 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 FBXL15Q9H469 300 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 GSKIPQ9P0R6 139 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
SF3B1-204ENST00000414963 MAST4O15021 2626 aa11.35□□□□□ -0.59
SF3B1-204ENST00000414963 BTBD17A6NE02 478 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
SF3B1-204ENST00000414963 M0QZK8 103 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
SF3B1-204ENST00000414963 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 OR1S1Q8NH92 325 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 WDR89Q96FK6 387 aaPredicted RBP11.34□□□□□ -0.59
SF3B1-204ENST00000414963 SLC25A33Q9BSK2 321 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 CHIAQ9BZP6 476 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 ZNF430Q9H8G1 570 aaPredicted RBP11.34□□□□□ -0.59
SF3B1-204ENST00000414963 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 ZFP57Q9NU63 452 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 HSPB7Q9UBY9 170 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 NSG2Q9Y328 171 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
SF3B1-204ENST00000414963 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.59
SF3B1-204ENST00000414963 F8P00451 2351 aa11.33□□□□□ -0.6
SF3B1-204ENST00000414963 FCN1O00602 326 aa11.33□□□□□ -0.6
SF3B1-204ENST00000414963 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
SF3B1-204ENST00000414963 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms