RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CLDN12P56749 244 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 PPP3R1P63098 170 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 HIST1H3AP68431 136 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 IFITM2Q01629 132 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SRSF6Q13247 344 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ENDOGQ14249 297 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC36A2Q495M3 483 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 CCDC58Q4VC31 144 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ACSM3Q53FZ2 586 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 MPV17L2Q567V2 206 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 YIF1BQ5BJH7 314 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 Q5BKY6 102 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RNASE13Q5GAN3 156 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 TEX30Q5JUR7 227 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 HIST2H3PS2Q5TEC6 136 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 CARD17Q5XLA6 110 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 C3orf33Q6P1S2 294 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RPL22L1Q6P5R6 122 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 C16orf87Q6PH81 154 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 C5orf46Q6UWT4 87 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 LRRN1Q6UXK5 716 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RTL4Q6ZR62 310 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 HIST2H3AQ71DI3 136 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC35D2Q76EJ3 337 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 LRRC28Q86X40 367 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 GDPD1Q8N9F7 314 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR6K6Q8NGW6 343 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR6N2Q8NGY6 317 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR2T4Q8NH00 348 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF563Q8TA94 476 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RNF133Q8WVZ7 376 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 CAPSLQ8WWF8 208 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC7A6Q92536 515 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 EEF1AKMT3Q96AZ1 226 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 DDA1Q9BW61 102 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ANGPTL4Q9BY76 406 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SAMD10Q9BYL1 202 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 POTEKPQ9BYX7 375 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 TBL1XR1Q9BZK7 514 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 FGF23Q9GZV9 251 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RERGLQ9H628 205 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 TMEM185BQ9H7F4 350 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 EDA2RQ9HAV5 297 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 PLEKHA1Q9HB21 404 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 CACYBPQ9HB71 228 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF160Q9HCG1 818 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 C8orf17Q9NRJ1 99 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 MTFP1Q9UDX5 166 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR5V1Q9UGF6 321 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 GNG8Q9UK08 70 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 NXT1Q9UKK6 140 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC22A13Q9Y226 551 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 RBMX2Q9Y388 322 aaKnown RBP1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 CUL9Q8IWT3 2517 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 VCANP13611 3396 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF407Q9C0G0 2248 aa1.94□□□□□ -2.1
HMGB1P11-201ENST00000413899 GPR179Q6PRD1 2367 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 PCNX2A6NKB5 2137 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 VPS13AQ96RL7 3174 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 IGHV7-4-1A0A0J9YVY3 117 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 LOC102725191A0A1B0GVB3 256 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 AIPO00170 330 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 ZNF593O00488 134 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 RGS5O15539 181 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 LYRM1O43325 122 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 GSTZ1O43708 216 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 GMDSO60547 372 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC16A7O60669 478 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 RAD1O60671 282 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 GATBO75879 557 aaKnown RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 GLSO94925 669 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 LDOC1O95751 146 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 APOA1P02647 267 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 TRAPPC2P0DI81 140 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 TRAPPC2BP0DI82 140 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 CXCR1P25024 350 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 SLC6A1P30531 599 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 RANBP1P43487 201 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 CLDN18P56856 261 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 TAS2R31P59538 309 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 COPZ1P61923 177 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 QRFPP83859 136 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 GPR176Q14439 515 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 TRAM1Q15629 374 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 Q499Y3 187 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 HSD17B12Q53GQ0 312 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 UBE2NLQ5JXB2 153 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 SPANXN2Q5MJ10 180 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 C10orf128Q5T292 105 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 IDNKQ5T6J7 187 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 C1orf185Q5T7R7 199 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 HES3Q5TGS1 186 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 XKRXQ6PP77 449 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 METAP1DQ6UB28 335 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 FAM131AQ6UXB0 335 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 DCXRQ7Z4W1 244 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR5AS1Q8N127 324 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 SPANXA2-OT1Q8N9U9 137 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 ST20-AS1Q8NBB2 130 aa1.93□□□□□ -2.1
HMGB1P11-201ENST00000413899 OR11H7Q8NGC8 314 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms