RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TCRBP04435 133 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 TRIM16LQ309B1 348 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 KLHDC1Q8N7A1 406 aa24.11■■□□□ 1.45
CSNK1E-206ENST00000413574 FAM240BA0A1B0GVZ2 78 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 TMEM128Q5BJH2 165 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 ZNF562Q6V9R5 426 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 SLC25A42Q86VD7 318 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 LHFPL5Q8TAF8 219 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 VSTM2AQ8TAG5 236 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 SEC22AQ96IW7 307 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 AIFM2Q9BRQ8 373 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 FAM103A1Q9BTL3 118 aaKnown RBP24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 WNT10AQ9GZT5 417 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 C20orf85Q9H1P6 137 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 ANXA7P20073 488 aaKnown RBP24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 ERVK-16P61578 105 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 TNXAQ16473 311 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 FOXRED2Q8IWF2 684 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 TMEM167AQ8TBQ9 72 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 GALNT14Q96FL9 552 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 BET1LQ9NYM9 111 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 KCNIP3Q9Y2W7 256 aa24.1■■□□□ 1.45
CSNK1E-206ENST00000413574 TRAV6A0A075B6T7 132 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 CNIH1O95406 144 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 KRTAP10-3P60369 221 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 DHODHQ02127 395 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 SRSF4Q08170 494 aaKnown RBP24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 PPP1R1AQ13522 171 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 TMEM187Q14656 261 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 FXYD3Q14802 87 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 C10orf99Q6UWK7 81 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 ABHD5Q8WTS1 349 aa24.09■■□□□ 1.45
CSNK1E-206ENST00000413574 AP4M1O00189 453 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 B3GALNT1O75752 331 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 IL6RP08887 468 aaPredicted RBP24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 EGR2P11161 476 aaPredicted RBP24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 MYOD1P15172 320 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 VAMP1P23763 118 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 STPG2Q8N412 459 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 GRPEL2Q8TAA5 225 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 NUDT15Q9NV35 164 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 WSB1Q9Y6I7 421 aa24.08■■□□□ 1.45
CSNK1E-206ENST00000413574 CDS2O95674 445 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 IGKV1-5P01602 117 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 C10orf55Q5SWW7 151 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 HIST2H2BDQ6DRA6 164 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 C12orf54Q6X4T0 127 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 MMD2Q8IY49 270 aa24.07■■□□□ 1.44
CSNK1E-206ENST00000413574 G3V318 75 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 UPK2O00526 184 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 IGF1P05019 195 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 OR9G9P0C7N8 305 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 IZUMO4Q1ZYL8 232 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 NRARPQ7Z6K4 114 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 CENPVQ7Z7K6 275 aaPredicted RBP24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 ZNF329Q86UD4 541 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 WFDC12Q8WWY7 111 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 ARPC1AQ92747 370 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 NSG2Q9Y328 171 aa24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 TET2Q6N021 2002 aaPredicted RBP24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 SELENOHQ8IZQ5 122 aaKnown RBP24.06■■□□□ 1.44
CSNK1E-206ENST00000413574 OPN1MWP04001 364 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 OPN1MW2P0DN77 364 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 OPN1MW3P0DN78 364 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 DEFA1P59665 94 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 DEFA3P59666 94 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 TMEM268Q5VZI3 342 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 OR4A5Q8NH83 315 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 ENKURQ8TC29 256 aa24.05■■□□□ 1.44
CSNK1E-206ENST00000413574 AKR1C2P52895 323 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 RPL8P62917 257 aaKnown RBP24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 ECSCRQ19T08 205 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 H2BFWTQ7Z2G1 175 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 ZNF695Q8IW36 515 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 C11orf44Q8N8P7 122 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 WIPF2Q8TF74 440 aaPredicted RBP24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 CASTOR1Q8WTX7 329 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 TMEM56Q96MV1 263 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 TMEM56-RWDD3S4R434 201 aa24.04■■□□□ 1.44
CSNK1E-206ENST00000413574 ACTL6BO94805 426 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 SFT2D2O95562 160 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 OR4E1P0C645 316 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 APELAP0DMC3 54 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 ANXA3P12429 323 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 CHPT1Q8WUD6 406 aa24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 RBPMSQ93062 196 aaKnown RBP24.03■■□□□ 1.44
CSNK1E-206ENST00000413574 A0A0G2JRQ6 117 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 E7EUB6 86 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 CREBL2O60519 120 aaPredicted RBP24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 HLA-GP17693 338 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 RAB25P57735 213 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 ANKRD55Q3KP44 614 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 LFNGQ8NES3 379 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 SGMS2Q8NHU3 365 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 SRSF12Q8WXF0 261 aaKnown RBP24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 PSMB11A5LHX3 300 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 H2AFB2P0C5Z0 115 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 OR2B8PP59922 312 aa24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 UBE2MP61081 183 aaKnown RBP24.02■■□□□ 1.44
CSNK1E-206ENST00000413574 C3orf56Q8N813 242 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms