RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 NDUFA2O43678 99 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FOXA1P55317 472 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C1orf122Q6ZSJ8 110 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FER1L6-AS1Q8NA97 138 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FBXO27Q8NI29 283 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SCAMP4Q969E2 229 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C9JAW5 83 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DLEU1O43261 78 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 PTP4A3O75365 173 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 P2RY2P41231 377 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 RPL34P49207 117 aaKnown RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM187Q14656 261 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB133Q30KQ1 61 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 CYTL1Q9NRR1 136 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 KLK9Q9UKQ9 250 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 WNT6Q9Y6F9 365 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ADGRB1O14514 1584 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DIP2BQ9P265 1576 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 MYO18AQ92614 2054 aaKnown RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DSCR4P56555 118 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 GNG5P63218 68 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 PRSS36Q5K4E3 855 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FBXW9Q5XUX1 488 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 WDR82Q6UXN9 313 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 STPG4Q8N801 248 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 LYPD6BQ8NI32 183 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM254Q8TBM7 123 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SDF2Q99470 211 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C1QTNF4Q9BXJ3 329 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 AGLP35573 1532 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TRBV4-1A0A0J9YWV2 114 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TBX6O95947 436 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 CELA2BP08218 269 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF117Q03924 483 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SPINK9Q5DT21 86 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SPEM1Q8N4L4 309 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SERP2Q8N6R1 65 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C10orf105Q8TEF2 133 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM170AQ8WVE7 144 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 Q96M85 177 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 GDF15Q99988 308 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 F8W1H4 67 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 UPK3AO75631 287 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 PI3P19957 117 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FKBP1AP62942 108 aaKnown RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF750Q32MQ0 723 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SHISA6Q6ZSJ9 500 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C14orf144Q96I85 54 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 MYO5BQ9ULV0 1848 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 A6NED7 52 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 NDUFB4O95168 129 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 GASTP01350 101 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SMN1Q16637 294 aaKnown RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 Q6ZVL8 140 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 CLDN19Q8N6F1 224 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 C11orf44Q8N8P7 122 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 IL36BQ9NZH7 164 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 NDUFA12Q9UI09 145 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SELENOKQ9Y6D0 94 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PREX1Q8TCU6 1659 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 ARHGEF28Q8N1W1 1705 aaKnown RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 H3BMG7 143 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 OSR1Q8TAX0 266 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 MRC1P22897 1456 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 BAZ2BQ9UIF8 2168 aaKnown RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 FAM90A27PA6NNH2 459 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PPIAL4GP0DN37 164 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TNFRSF1BP20333 461 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 RND2P52198 227 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 EMC6Q9BV81 110 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SLC25A39Q9BZJ4 359 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM242Q9NWH2 141 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 QRICH2Q9H0J4 1663 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 LOC105371242A0A075B767 164 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PPIAL4CA0A0B4J2A2 164 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 A0A0J9YW62 118 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 CXorf51AA0A1B0GTR3 108 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PEBP1P30086 187 aaKnown RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 RNASE4P34096 147 aaKnown RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 EVX1P49640 407 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 LY6G5CQ5SRR4 150 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 BVES-AS1Q5T3Y7 98 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 FAM104BQ5XKR9 115 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 GGACTQ9BVM4 153 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PLA2G12BQ9BX93 195 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 SCRT2Q9NQ03 307 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 A0A096LPE4 126 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV14DV4A0A0A6YYC5 116 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 A0A1B0GWJ7 208 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 A0A1W2PPZ6 126 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PRSS38A1L453 326 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 WTIPA6NIX2 430 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-202ENST00000411767 PRYO14603 147 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 CLDN14O95500 239 aa3.92□□□□□ -1.78
PTPN13-202ENST00000411767 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms