RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 FAM3BP58499 235 aaPredicted RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 PPP3R1P63098 170 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 MRPL28Q13084 256 aaKnown RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 TNXAQ16473 311 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 ZIK1Q3SY52 487 aaPredicted RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 RBM48Q5RL73 367 aaKnown RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 TTC23Q5W5X9 447 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 Q6ZSN1 163 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF554Q86TJ5 538 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 PDPNQ86YL7 162 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 GAPTQ8N292 157 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 ACBD7Q8N6N7 88 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 OR2G2Q8NGZ5 317 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 OR5AK2Q8NH90 309 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 TRUB1Q8WWH5 349 aaKnown RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 SRSF12Q8WXF0 261 aaKnown RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 FAM210BQ96KR6 192 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 C4orf36Q96KX1 117 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 FAM210AQ96ND0 272 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 SLC29A1Q99808 456 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 METTL9Q9H1A3 318 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 PLGRKTQ9HBL7 147 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 SPACA1Q9HBV2 294 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 SMPD3Q9NY59 655 aaPredicted RBP4.52□□□□□ -1.69
LINC00396-201ENST00000411690 BLOC1S6Q9UL45 172 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 S4R3C0 116 aa4.52□□□□□ -1.69
LINC00396-201ENST00000411690 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 TMEM212A6NML5 194 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF705EA8MWA4 302 aaPredicted RBP4.51□□□□□ -1.69
LINC00396-201ENST00000411690 NOL3O60936 208 aaKnown RBP4.51□□□□□ -1.69
LINC00396-201ENST00000411690 CA11O75493 328 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 GPX5O75715 221 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 CTSDP07339 412 aaPredicted RBP4.51□□□□□ -1.69
LINC00396-201ENST00000411690 RAB3AP20336 220 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 CCR9P51686 369 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 GABARAPL2P60520 117 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF529Q6P280 563 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF773Q6PK81 442 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 TMPRSS11AQ6ZMR5 421 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 CBR4Q8N4T8 237 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 TTC9CQ8N5M4 171 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF383Q8NA42 475 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF555Q8NEP9 628 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 IL1F10Q8WWZ1 152 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 JAM3Q9BX67 310 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 GABARAPL3Q9BY60 117 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 PAK1IP1Q9NWT1 392 aaPredicted RBP4.51□□□□□ -1.69
LINC00396-201ENST00000411690 IL36GQ9NZH8 169 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 CKLFQ9UBR5 152 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 PEX16Q9Y5Y5 336 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 X6R8D5 127 aa4.51□□□□□ -1.69
LINC00396-201ENST00000411690 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 IGHV3-35A0A0C4DH35 117 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 A0A1B0GW64 132 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 IRGMA1A4Y4 181 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 EI24O14681 340 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 PROP1O75360 226 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 CLEC3BP05452 202 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 GTF2F2P13984 249 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 MYL12AP19105 171 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 POLR2IP36954 125 aaKnown RBP4.5□□□□□ -1.69
LINC00396-201ENST00000411690 TFPI2P48307 235 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 SOX2P48431 317 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF85Q03923 595 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 RAB12Q6IQ22 244 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 LHFPL3Q86UP9 236 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 SLC25A42Q86VD7 318 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 PARP16Q8N5Y8 322 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 OR51A2Q8NGJ7 313 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 RAB2BQ8WUD1 216 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 ACOT12Q8WYK0 555 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 BORCS5Q969J3 196 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 EEF1AKMT3Q96AZ1 226 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 SPIN2AQ99865 258 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 SPIN2BQ9BPZ2 258 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 ATG101Q9BSB4 218 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 AGMATQ9BSE5 352 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 SLC35D1Q9NTN3 355 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 ABRACLQ9P1F3 81 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF257Q9Y2Q1 563 aa4.5□□□□□ -1.69
LINC00396-201ENST00000411690 A0A1W2PP11 408 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 UBE2QL1A1L167 161 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
LINC00396-201ENST00000411690 ITGB1BP1O14713 200 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 ZNF780AO75290 641 aaPredicted RBP4.49□□□□□ -1.69
LINC00396-201ENST00000411690 SC5DO75845 299 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 ACTL6BO94805 426 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 ALPLP05186 524 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 RPA2P15927 270 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 BTF3P20290 206 aaKnown RBP4.49□□□□□ -1.69
LINC00396-201ENST00000411690 PSMB6P28072 239 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 SNRPGP62308 76 aaKnown RBP4.49□□□□□ -1.69
LINC00396-201ENST00000411690 PRSS8Q16651 343 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 SLC22A6Q4U2R8 563 aa4.49□□□□□ -1.69
LINC00396-201ENST00000411690 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms