RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MLXQ9UH92 298 aa12.51□□□□□ -0.41
MRPL55-220ENST00000411464 PLECQ15149 4684 aaKnown RBP12.5□□□□□ -0.41
MRPL55-220ENST00000411464 METTL21EPA6NDL7 271 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 TEX22C9J3V5 150 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 RAB27BO00194 218 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 SLC22A5O76082 557 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 NDUFB8O95169 186 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 IL6RP08887 468 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-220ENST00000411464 RPL27AP46776 148 aaKnown RBP12.5□□□□□ -0.41
MRPL55-220ENST00000411464 C19orf35Q6ZS72 473 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 CCDC140Q96MF4 163 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 OR2A7Q96R45 310 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 TPRKBQ9Y3C4 175 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 S4R3C0 116 aa12.5□□□□□ -0.41
MRPL55-220ENST00000411464 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 A8MWP6 167 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 PDCD5O14737 125 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 KBTBD11O94819 623 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 CTXN2P0C2S0 81 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 MAS1LP35410 378 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 MLLT11Q13015 90 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-220ENST00000411464 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 TM4SF20Q53R12 229 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 RBPMS2Q6ZRY4 209 aaKnown RBP12.49□□□□□ -0.41
MRPL55-220ENST00000411464 OR4S2Q8NH73 311 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 FANCD2OSQ96PS1 177 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
MRPL55-220ENST00000411464 OR2W1Q9Y3N9 320 aa12.49□□□□□ -0.41
MRPL55-220ENST00000411464 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 CLEC3BP05452 202 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 CRYGCP07315 174 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 DEFA4P12838 97 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 AREGP15514 252 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
MRPL55-220ENST00000411464 RAB6AP20340 208 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 NFYAP23511 347 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-220ENST00000411464 PSMB6P28072 239 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 RPL30P62888 115 aaKnown RBP12.48□□□□□ -0.41
MRPL55-220ENST00000411464 SSX1Q16384 188 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 CEMP1Q6PRD7 247 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-220ENST00000411464 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 OR1L6Q8NGR2 347 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 KRTAP17-1Q9BYP8 105 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 CCDC90BQ9GZT6 254 aa12.48□□□□□ -0.41
MRPL55-220ENST00000411464 TRBV7-1A0A0A6YYK4 115 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 IFITM5A6NNB3 132 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 E7EUB6 86 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 SPRY2O43597 315 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 RGS10O43665 173 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 DTYMKP23919 212 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 CRHBPP24387 322 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 BMI1P35226 326 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 APOC4P55056 127 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 Q6ZWC4 215 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 LYG2Q86SG7 212 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 SLC38A6Q8IZM9 456 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
MRPL55-220ENST00000411464 TCTEX1D2Q8WW35 142 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 MARC2Q969Z3 335 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 MGLLQ99685 303 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 HSD17B10Q99714 261 aaKnown RBP12.47□□□□□ -0.41
MRPL55-220ENST00000411464 ATG5Q9H1Y0 275 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 DUSP21Q9H596 190 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 SPATA2Q9UM82 520 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
MRPL55-220ENST00000411464 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-220ENST00000411464 TRAV1-2A0A0B4J238 106 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 HRASP01112 189 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 OR10A3P58181 314 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 CDNFQ49AH0 187 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 ZNF585BQ52M93 769 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 OR2C3Q8N628 320 aa12.46□□□□□ -0.41
MRPL55-220ENST00000411464 MRPL27Q9P0M9 148 aaKnown RBP12.46□□□□□ -0.41
MRPL55-220ENST00000411464 ELF5Q9UKW6 265 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-220ENST00000411464 A0A1B0GW64 132 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 IGLV2-14P01704 120 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 CTRB1P17538 263 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 RPL8P62917 257 aaKnown RBP12.45□□□□□ -0.42
MRPL55-220ENST00000411464 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 CTRB2Q6GPI1 263 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 SSX9Q7RTT3 188 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 DCSTAMPQ9H295 470 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 KLK9Q9UKQ9 250 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 UFC1Q9Y3C8 167 aa12.45□□□□□ -0.42
MRPL55-220ENST00000411464 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 UBE2CO00762 179 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 REG1AP05451 166 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 C8orf88P0DMB2 117 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 GALP22466 123 aa12.44□□□□□ -0.42
MRPL55-220ENST00000411464 MYL9P24844 172 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms