RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 OR13D1Q8NGV5 346 aa11.46□□□□□ -0.58
LIMS2-206ENST00000409754 ZDHHC16Q969W1 377 aa11.46□□□□□ -0.58
LIMS2-206ENST00000409754 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.58
LIMS2-206ENST00000409754 PCGF1Q9BSM1 259 aa11.46□□□□□ -0.58
LIMS2-206ENST00000409754 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.58
LIMS2-206ENST00000409754 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 A8MXK9 166 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 C22orf46C9J442 243 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 IFNA17P01571 189 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-206ENST00000409754 ATP6V0CP27449 155 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 PRRX1P54821 245 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 ARL16Q0P5N6 197 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-206ENST00000409754 GNPNAT1Q96EK6 184 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-206ENST00000409754 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 NABP2Q9BQ15 211 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 SSBP3Q9BWW4 388 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-206ENST00000409754 SH3BGRL3Q9H299 93 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
LIMS2-206ENST00000409754 DOCK11Q5JSL3 2073 aa11.45□□□□□ -0.58
LIMS2-206ENST00000409754 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 RAB19A4D1S5 217 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 TEX46H3BTG2 121 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 NDUFS7O75251 213 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
LIMS2-206ENST00000409754 IFNA5P01569 189 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 TMEM177Q53S58 311 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 PXDC1Q5TGL8 231 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 PDPNQ86YL7 162 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 BEND2Q8NDZ0 799 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 MARC2Q969Z3 335 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 CLCC1Q96S66 551 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
LIMS2-206ENST00000409754 TMEM14BQ9NUH8 114 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
LIMS2-206ENST00000409754 HIVEP1P15822 2718 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 ATP6V1FQ16864 119 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 HLA-DRB5Q30154 266 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 LILRB2Q8N423 598 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 MMP26Q9NRE1 261 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 BET1LQ9NYM9 111 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
LIMS2-206ENST00000409754 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
LIMS2-206ENST00000409754 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 H7C2Y5 167 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 TRIM77I1YAP6 450 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 M0R1W7 72 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 UPK2O00526 184 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SHOXO15266 292 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 ARG1P05089 322 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 VDAC2P45880 294 aaPredicted RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 REG1BP48304 166 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 RAB13P51153 203 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SPINK9Q5DT21 86 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 IL34Q6ZMJ4 242 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 Q6ZRG5 221 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 OR2G3Q8NGZ4 309 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 LHX4Q969G2 390 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 FLYWCH2Q96CP2 140 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 CCL19Q99731 98 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 TCF19Q9Y242 345 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 MC5RP33032 325 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 OR8G2PQ6IF36 304 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SLC25A24Q6NUK1 477 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 PUSL1Q8N0Z8 303 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 OR10P1Q8NGE3 313 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 OR4C13Q8NGP0 309 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 LYPD6BQ8NI32 183 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 SCGB1C1Q8TD33 95 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 MBD6Q96DN6 1003 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 HIPK2Q9H2X6 1198 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 NARFLQ9H6Q4 476 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 ZNF257Q9Y2Q1 563 aa11.42□□□□□ -0.58
LIMS2-206ENST00000409754 AMMECR1Q9Y4X0 333 aaPredicted RBP11.42□□□□□ -0.58
LIMS2-206ENST00000409754 C15orf62A8K5M9 175 aa11.41□□□□□ -0.58
LIMS2-206ENST00000409754 KRBOX1C9JBD0 128 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms