RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 PRRG2O14669 202 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 NPSP0C0P6 89 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 HTD2P86397 168 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 GFRALQ6UXV0 394 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 ABHD5Q8WTS1 349 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 IFI27L2Q9H2X8 130 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 SPTA1P02549 2419 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 DPRXA6NFQ7 191 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM87AP0C7U9 286 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 DUTP33316 252 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 GPR12P47775 334 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 ERVFC1-1P60608 527 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 CCL8P80075 99 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM210BQ96KR6 192 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 CALYQ9NYX4 217 aa12.56□□□□□ -0.4
SCAMP4-202ENST00000409472 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 ATRXP46100 2492 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 FCGR3BO75015 233 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 ADH4P08319 380 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 OR9G9P0C7N8 305 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 GATA4P43694 442 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 C17orf58Q2M2W7 97 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 TMEM14EPQ6UXP3 125 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 MRGPRGQ86SM5 289 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 CCL13Q99616 98 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 RPRMQ9NS64 109 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 YLPM1P49750 1951 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 CLDN14O95500 239 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 IFNA5P01569 189 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 GYPAP02724 150 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 DLK1P80370 383 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 STUMQ69YW2 141 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 TVP23CQ96ET8 276 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 GAFA1Q96PS6 74 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNRD1Q9P1U0 126 aa12.55□□□□□ -0.4
SCAMP4-202ENST00000409472 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 B4DEV8 164 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 M0R1X1 148 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 AMBPP02760 352 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 ELLP55199 621 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 AARDQ4LEZ3 155 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 RNF7Q9UBF6 113 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 JPT1Q9UK76 154 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 RBFOX3A6NFN3 312 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 C16orf97H3BN30 126 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 MMP23AO75900 390 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 CGB3P0DN86 165 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 CGB7P0DN87 165 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 CEBPGP53567 150 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 ADIPOQQ15848 244 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 IQCJQ1A5X6 159 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 ZNF66Q6ZN08 573 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 H2BFWTQ7Z2G1 175 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 HSD17B10Q99714 261 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 NIPSNAP3BQ9BS92 247 aa12.54□□□□□ -0.4
SCAMP4-202ENST00000409472 FAM90A26D6RGX4 464 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 F2RL2O00254 374 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 RBMXL2O75526 392 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 GZMHP20718 246 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 ICAM4Q14773 271 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 WDR61Q9GZS3 305 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 IL19Q9UHD0 177 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 POLEQ07864 2286 aa12.53□□□□□ -0.4
SCAMP4-202ENST00000409472 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 PMS2P5A8MQ11 134 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 IGKV1D-33P01593 117 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 IGKV1-33P01594 117 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 CBLN4Q9NTU7 201 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 KIAA1456Q9P272 454 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 NBASA2RRP1 2371 aa12.52□□□□□ -0.4
SCAMP4-202ENST00000409472 YPEL1O60688 119 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 FCN3O75636 299 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 OR4A8P0C604 315 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 HBG1P69891 147 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 HBG2P69892 147 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 MSMO1Q15800 293 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 NUP37Q8NFH4 326 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 YPEL2Q96QA6 119 aa12.52□□□□□ -0.41
SCAMP4-202ENST00000409472 K7ENP7 123 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 RAB29O14966 203 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms