RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CISD1Q9NZ45 108 aaKnown RBP6.98□□□□□ -1.29
SNX13-201ENST00000409076 RNF115Q9Y4L5 304 aa6.98□□□□□ -1.29
SNX13-201ENST00000409076 PXMP4Q9Y6I8 212 aa6.98□□□□□ -1.29
SNX13-201ENST00000409076 SPAARA0A1B0GVQ0 90 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 C17orf112F2Z3M2 114 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 KBTBD11O94819 623 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 HRASP01112 189 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 CRISP2P16562 243 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 CTSSP25774 331 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 CLDN18P56856 261 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 FOXF2Q12947 444 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 HLA-DRB5Q30154 266 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 OIT3Q8WWZ8 545 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 CDX2Q99626 313 aaPredicted RBP6.97□□□□□ -1.29
SNX13-201ENST00000409076 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 DCAF16Q9NXF7 216 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 C9orf172C9J069 976 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 KLRC4-KLRK1H3BQV0 150 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 SNAI2O43623 268 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 TCF21O43680 179 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 IL18BPO95998 194 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 FKBP2P26885 142 aaKnown RBP6.97□□□□□ -1.29
SNX13-201ENST00000409076 S100A7P31151 101 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 CDKN1AP38936 164 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 LGALS4P56470 323 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 Q6ZR03 302 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
SNX13-201ENST00000409076 MS4A5Q9H3V2 200 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 M0QZ24 198 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 IRF2P14316 349 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 IGFBP2P18065 325 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 C19orf35Q6ZS72 473 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 TGIF2LYQ8IUE0 185 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 TMEM183AQ8IXX5 376 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 RIMS4Q9H426 269 aaPredicted RBP6.97□□□□□ -1.29
SNX13-201ENST00000409076 RELNP78509 3460 aa6.97□□□□□ -1.29
SNX13-201ENST00000409076 SETD2Q9BYW2 2564 aaPredicted RBP6.97□□□□□ -1.29
SNX13-201ENST00000409076 LRRC30A6NM36 301 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 MBP02144 154 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 CD82P27701 267 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 HINT1P49773 126 aaPredicted RBP6.96□□□□□ -1.29
SNX13-201ENST00000409076 UCP2P55851 309 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 SSPNQ14714 243 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 SPRNQ5BIV9 151 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 FBXW9Q5XUX1 488 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 ZNF295-AS1Q8N0V1 137 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 OR10G8Q8NGN5 311 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 C10orf35Q96D05 121 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 CCL13Q99616 98 aa6.96□□□□□ -1.29
SNX13-201ENST00000409076 KLF13Q9Y2Y9 288 aaPredicted RBP6.96□□□□□ -1.29
SNX13-201ENST00000409076 ZZEF1O43149 2961 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 TRAV5A0A0B4J249 113 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 RNF212BA8MTL3 300 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 SERF1AO75920 110 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 ORM2P19652 201 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 RPL31P62899 125 aaKnown RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 DAZAP2Q15038 168 aaPredicted RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 PEAR1Q5VY43 1037 aaPredicted RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 RNASEKQ6P5S7 137 aaKnown RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 DEFB123Q8N688 67 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 OCC1Q8TAD7 63 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 WDR54Q9H977 334 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 SEPSECSQ9HD40 501 aaKnown RBP6.96□□□□□ -1.3
SNX13-201ENST00000409076 IGLV3-32A0A0A0MS00 114 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 RBFOX2O43251 390 aaKnown RBP eCLIP6.96□□□□□ -1.36e-8■■■□□ 15.7
SNX13-201ENST00000409076 ZNF253O75346 499 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 C10orf55Q5SWW7 151 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 TMEM42Q69YG0 159 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 LCN12Q6JVE5 192 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 MIR17HGQ75NE6 70 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 SIGLECL1Q8N7X8 197 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 LRTM2Q8N967 370 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 SPRR3Q9UBC9 169 aa6.96□□□□□ -1.3
SNX13-201ENST00000409076 IGHV3OR16-8A0A075B7F1 116 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 DUXBA0A1W2PPF3 345 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 TOX3O15405 576 aaPredicted RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 SP1P08047 785 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 TAS2R60P59551 318 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 Q56UQ5 140 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 LEMD1Q68G75 181 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 HCP5Q6MZN7 132 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 SNIP1Q8TAD8 396 aaKnown RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 CTDSP1Q9GZU7 261 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 MRPL18Q9H0U6 180 aaKnown RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 NAGKQ9UJ70 344 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 COLQQ9Y215 455 aaPredicted RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 ELOA3CA0A087WX78 387 aaPredicted RBP6.95□□□□□ -1.3
SNX13-201ENST00000409076 LNP1A1A4G5 178 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 OR5B21A6NL26 309 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
SNX13-201ENST00000409076 IGHV1-2P23083 117 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms