RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 AGMATQ9BSE5 352 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 WNT5BQ9H1J7 359 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 ST20Q9HBF5 79 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 OSTCQ9NRP0 149 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 C17orf51A8MQB3 221 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 CGAP01215 116 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 SSTR5P35346 364 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 MEOX1P50221 254 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 TMEM54Q969K7 222 aa15.03■□□□□ -0
SMPD4-202ENST00000409031 A0A0G2JMZ2 1700 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 LRRC37A2A6NM11 1700 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 H3BUT2 72 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 GNG7O60262 68 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 TMEM256Q8N2U0 113 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 OR5A1Q8NGJ0 315 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 ZNF501Q96CX3 271 aaPredicted RBP15.02■□□□□ -0
SMPD4-202ENST00000409031 C20orf144Q9BQM9 153 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 CD40P25942 277 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 FBXW9Q5XUX1 488 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 UNQ5815/PRO19632Q6UWF5 114 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 TCF24Q7RTU0 167 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 NEU1Q99519 415 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 MAP1LC3AQ9H492 121 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 TCFL5Q9UL49 500 aa15.02■□□□□ -0
SMPD4-202ENST00000409031 INO80CQ6PI98 192 aaPredicted RBP15.02□□□□□ -0.01
SMPD4-202ENST00000409031 MDP1Q86V88 176 aa15.02□□□□□ -0.01
SMPD4-202ENST00000409031 WDR54Q9H977 334 aa15.02□□□□□ -0.01
SMPD4-202ENST00000409031 hCG_38984A0A1B0GV85 526 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF83P51522 516 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 TWIST1Q15672 202 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 PHF7Q9BWX1 381 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-202ENST00000409031 TRAV30A0A087WSZ9 112 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 CTSBP07858 339 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 MPV17P39210 176 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 SRSF12Q8WXF0 261 aaKnown RBP15.01□□□□□ -0.01
SMPD4-202ENST00000409031 F5H697 171 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 CFPP27918 469 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 SEC11AP67812 179 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 HIST1H1AQ02539 215 aaPredicted RBP15.01□□□□□ -0.01
SMPD4-202ENST00000409031 OCC1Q8TAD7 63 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 MESP1Q9BRJ9 268 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 BMI1P35226 326 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 NEUROG1Q92886 237 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 ZDHHC16Q969W1 377 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 SIGMAR1Q99720 223 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 CLEC1BQ9P126 229 aa15.01□□□□□ -0.01
SMPD4-202ENST00000409031 PARP14Q460N5 1801 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 PPIAL4DF5H284 164 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 WFDC8Q8IUA0 241 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 OR2K2Q8NGT1 345 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 SNCGO76070 127 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 WDR31Q8NA23 367 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 EAF1Q96JC9 268 aaPredicted RBP15□□□□□ -0.01
SMPD4-202ENST00000409031 PLAUP00749 431 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF256Q9Y2P7 627 aaPredicted RBP15□□□□□ -0.01
SMPD4-202ENST00000409031 C7orf71A4D174 169 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 SLC25A17O43808 307 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 GCSAMQ8N6F7 178 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 FAM131CQ96AQ9 280 aa15□□□□□ -0.01
SMPD4-202ENST00000409031 SNAI2O43623 268 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 RIPPLY3P57055 190 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 C9orf50Q5SZB4 431 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 MOGAT3Q86VF5 341 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 MRPL13Q9BYD1 178 aaKnown RBP14.99□□□□□ -0.01
SMPD4-202ENST00000409031 RNF7Q9UBF6 113 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF257Q9Y2Q1 563 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
SMPD4-202ENST00000409031 A0A1B0GWB2 263 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF146Q15072 292 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 VSIRQ9H7M9 311 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 WNT16Q9UBV4 365 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 FREM3P0C091 2139 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 IGKV1D-13A0A0B4J2D9 117 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 M0R3E3 92 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 IL4P05112 153 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 IGKV1-13P0DP09 117 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 RPL8P62917 257 aaKnown RBP14.99□□□□□ -0.01
SMPD4-202ENST00000409031 GAGE1Q13065 139 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 AMMECR1LQ6DCA0 310 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 SPINK14Q6IE38 97 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 LINC01551Q86U37 167 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 TNFRSF19Q9NS68 423 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 JPT1Q9UK76 154 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 TGFBR3LH3BV60 316 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 TIMP3P35625 211 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 FAM90A2PQ658T7 463 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 TTC9CQ8N5M4 171 aa14.99□□□□□ -0.01
SMPD4-202ENST00000409031 PTGDSP41222 190 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 PDCD11Q14690 1871 aaKnown RBP14.98□□□□□ -0.01
SMPD4-202ENST00000409031 ZIC3O60481 467 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 CTSSP25774 331 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 RPS20P60866 119 aaKnown RBP14.98□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF841Q6ZN19 808 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 ZNF502Q8TBZ5 544 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 MYOFQ9NZM1 2061 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 SVILO95425 2214 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 COL4A5P29400 1685 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 IGHV4-34P06331 123 aa14.98□□□□□ -0.01
SMPD4-202ENST00000409031 TMPRSS2O15393 492 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms