RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 HS3ST1O14792 307 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 LHX2P50458 406 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 ATP5J2P56134 94 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 NECAP1Q8NC96 275 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 OR10V1Q8NGI7 309 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 RDH5Q92781 318 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 C5orf30Q96GV9 206 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 EAF1Q96JC9 268 aaPredicted RBP13.73□□□□□ -0.21
CDK11B-204ENST00000407249 TTTY12Q9BZ98 90 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 SLC39A9Q9NUM3 307 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 ZNF586Q9NXT0 402 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 CDC42EP3Q9UKI2 254 aa13.73□□□□□ -0.21
CDK11B-204ENST00000407249 TRAV24A0A0B4J272 114 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 A0A1W2PPV4 95 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 RPL23P62829 140 aaKnown RBP13.72□□□□□ -0.21
CDK11B-204ENST00000407249 OR8I2Q8N0Y5 310 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 TAF15Q92804 592 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDK11B-204ENST00000407249 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 NCKAP5O14513 1909 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 IGHV1-69-2A0A0G2JMI3 117 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 KITLGP21583 273 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 HINT1P49773 126 aaPredicted RBP13.72□□□□□ -0.21
CDK11B-204ENST00000407249 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 Q6ZN92 141 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 IL1F10Q8WWZ1 152 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 GEMIN7Q9H840 131 aaKnown RBP13.72□□□□□ -0.21
CDK11B-204ENST00000407249 TMEM106BQ9NUM4 274 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 OR1A1Q9P1Q5 309 aa13.72□□□□□ -0.21
CDK11B-204ENST00000407249 MRPS16Q9Y3D3 137 aaKnown RBP13.72□□□□□ -0.21
CDK11B-204ENST00000407249 GALR1P47211 349 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 LINC00596Q86U02 117 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 MDS2Q8NDY4 140 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 OR4B1Q8NGF8 309 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 ZNF488Q96MN9 340 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 IMMP2LQ96T52 175 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 KIAA2026Q5HYC2 2103 aa13.71□□□□□ -0.21
CDK11B-204ENST00000407249 C5orf49A4QMS7 147 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 LRP5LA4QPB2 252 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 TMEM250H0YL14 139 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 H7BYZ3 331 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 SP1P08047 785 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 ZNF585BQ52M93 769 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 TMEM170AQ8WVE7 144 aa13.71□□□□□ -0.22
CDK11B-204ENST00000407249 UBE2L5PA0A1B0GUS4 154 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 NPIPB11E5RHQ5 1161 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.7□□□□□ -0.22
CDK11B-204ENST00000407249 GABRA2P47869 451 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 FAM3BP58499 235 aaPredicted RBP13.7□□□□□ -0.22
CDK11B-204ENST00000407249 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 DEGS1O15121 323 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 GPR6P46095 362 aaPredicted RBP13.7□□□□□ -0.22
CDK11B-204ENST00000407249 TLE1Q04724 770 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 TESK1Q15569 626 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 LINC00696Q6ZRV3 163 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.7□□□□□ -0.22
CDK11B-204ENST00000407249 TMEM251Q8N6I4 163 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 PRRG4Q9BZD6 226 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 GTSF1LQ9H1H1 148 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 OR51B2Q9Y5P1 312 aa13.7□□□□□ -0.22
CDK11B-204ENST00000407249 A0A096LPE4 126 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 A0A1W2PPZ6 126 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
CDK11B-204ENST00000407249 MRPL33O75394 65 aaKnown RBP13.69□□□□□ -0.22
CDK11B-204ENST00000407249 CNIH1O95406 144 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 ARF1P84077 181 aaKnown RBP13.69□□□□□ -0.22
CDK11B-204ENST00000407249 SLC38A11Q08AI6 406 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 RTP5Q14D33 572 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 C5orf17Q8NAS9 161 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 MRAP2Q96G30 205 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 PARLQ9H300 379 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 TIMM9Q9Y5J7 89 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 C3orf80F5H4A9 247 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 K7EQM0 130 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 HRASP01112 189 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 PLA2G5P39877 138 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 PSMB3P49720 205 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 MEOX1P50221 254 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 APOBEC3DQ96AK3 386 aaPredicted RBP13.69□□□□□ -0.22
CDK11B-204ENST00000407249 DLL3Q9NYJ7 618 aa13.69□□□□□ -0.22
CDK11B-204ENST00000407249 PDE6DO43924 150 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 SS18L1O75177 396 aaPredicted RBP13.68□□□□□ -0.22
CDK11B-204ENST00000407249 NGFP01138 241 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 CTRLP40313 264 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 MAGEA5P43359 124 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 LRRC10Q5BKY1 277 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 TMEM14EPQ6UXP3 125 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 DOCK10Q96BY6 2186 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
CDK11B-204ENST00000407249 SPINK2P20155 84 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 AESQ08117 197 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 CLEC12BQ2HXU8 276 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 ACSM6Q6P461 480 aa13.68□□□□□ -0.22
CDK11B-204ENST00000407249 INO80CQ6PI98 192 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms