RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 VSIRQ9H7M9 311 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 ENY2Q9NPA8 101 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 KIAA1456Q9P272 454 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 PRNDQ9UKY0 176 aa20.13■□□□□ 0.81
DNMT3A-206ENST00000406659 NUPL2O15504 423 aaKnown RBP20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 VWC2Q2TAL6 325 aa20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 FAM71F2Q6NXP2 309 aa20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 CENPVQ7Z7K6 275 aaPredicted RBP20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 ABHD12Q8N2K0 398 aa20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 RBMXL1Q96E39 390 aaKnown RBP20.12■□□□□ 0.81
DNMT3A-206ENST00000406659 A0A087X0M5 115 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 TRAV1-1A0A0B4J248 108 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 A0A1B0GX30 115 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 DNASE2O00115 360 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 ELLP55199 621 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 SP5Q6BEB4 398 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 ZNF841Q6ZN19 808 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 SMDT1Q9H4I9 107 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 OR51B2Q9Y5P1 312 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 H0YJW9 148 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 UPK2O00526 184 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 TSPAN4O14817 238 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 REG1BP48304 166 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 HNF4GQ14541 408 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 C11orf71Q6IPW1 123 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 ETV3LQ6ZN32 361 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 ZNF709Q8N972 641 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 OSR1Q8TAX0 266 aaPredicted RBP20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 RARRES2Q99969 163 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 SLC35B3Q9H1N7 401 aa20.11■□□□□ 0.81
DNMT3A-206ENST00000406659 A0A1W2PPH5 198 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 IL6RP08887 468 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 GNLYP22749 145 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 RAB11AP62491 216 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 OR5AN1Q8NGI8 311 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 NEU4Q8WWR8 484 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 TIMD4Q96H15 378 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 TMEM133Q9H2Q1 129 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 MIOXQ9UGB7 285 aa20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 SMG1Q96Q15 3661 aaKnown RBP20.1■□□□□ 0.81
DNMT3A-206ENST00000406659 FAM74A7A6NL05 159 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 SRRM4A7MD48 611 aaKnown RBP20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 RRHO14718 337 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 UQCRFS1P47985 274 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 FAM74A3Q4VXF1 159 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 OR8B3Q8NGG8 313 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 MBD3L1Q8WWY6 194 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 RAB1CQ92928 201 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 OR8B2Q96RD0 313 aa20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 TET2Q6N021 2002 aaPredicted RBP20.09■□□□□ 0.81
DNMT3A-206ENST00000406659 ABCA4P78363 2273 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 SOD3P08294 240 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 IL3RAP26951 378 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 NPBWR1P48145 328 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 HAGHQ16775 308 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 C11orf42Q8N5U0 333 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 ITLN2Q8WWU7 325 aaPredicted RBP20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 LHX4Q969G2 390 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 RCC1LQ96I51 464 aaKnown RBP20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 NABP2Q9BQ15 211 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 HINT2Q9BX68 163 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 BET1LQ9NYM9 111 aa20.08■□□□□ 0.81
DNMT3A-206ENST00000406659 C17orf112F2Z3M2 114 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 LY6HO94772 140 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 CD1BP29016 333 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 LCN15Q6UWW0 184 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 ST6GALNAC6Q969X2 333 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 FLYWCH2Q96CP2 140 aaKnown RBP20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 NEIL1Q96FI4 390 aaPredicted RBP20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 HARBI1Q96MB7 349 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 GGACTQ9BVM4 153 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 FKBP11Q9NYL4 201 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 ZNF257Q9Y2Q1 563 aa20.08■□□□□ 0.8
DNMT3A-206ENST00000406659 ITPR1Q14643 2758 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 KBTBD11O94819 623 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 MBP02144 154 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 IFNA4P05014 189 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 SAA1P0DJI8 122 aaPredicted RBP20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 ZNF137PP52743 207 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 ZNF726P1Q15940 193 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 TMEM177Q53S58 311 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 ZNF787Q6DD87 383 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 NPCDR1Q9BY65 106 aa20.07■□□□□ 0.8
DNMT3A-206ENST00000406659 AGAP20933 346 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 MDKP21741 143 aaPredicted RBP20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 DIAPH2-AS1Q14236 149 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 PDPNQ86YL7 162 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 TGIF2LXQ8IUE1 241 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 CLRN3Q8NCR9 226 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 CACNA1AO00555 2505 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 PPIAL4CA0A0B4J2A2 164 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 SMCO3A2RU48 225 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 PPIAL4GP0DN37 164 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 OR13C7P0DN81 318 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 MYOD1P15172 320 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 PRRX1P54821 245 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 ZNF506Q5JVG8 444 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 FFAR4Q5NUL3 377 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 ACSM6Q6P461 480 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 DTX2Q86UW9 622 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms