RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 M0QZ24 198 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 ARPC1BO15143 372 aaKnown RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 B3GALNT1O75752 331 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 SERPINE2P07093 398 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 ELANEP08246 267 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 IL7P13232 177 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 RPA2P15927 270 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 MAS1LP35410 378 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 NDPQ00604 133 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 ECSCRQ19T08 205 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 UNQ5815/PRO19632Q6UWF5 114 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 GRPEL2Q8TAA5 225 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 TMEM68Q96MH6 324 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 CITED2Q99967 270 aaPredicted RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 SLC25A21Q9BQT8 299 aaPredicted RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 C7orf50Q9BRJ6 194 aaKnown RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 FAM103A1Q9BTL3 118 aaKnown RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 C5orf66Q9H5L9 145 aa10.76□□□□□ -0.69
VPREB1-202ENST00000403807 TSSC4Q9Y5U2 329 aaPredicted RBP10.76□□□□□ -0.69
VPREB1-202ENST00000403807 TENM1Q9UKZ4 2725 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
VPREB1-202ENST00000403807 LINC00854A0A1B0GVQ3 168 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 H0Y980 276 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 KRASP01116 189 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 IGHG4P01861 327 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 CD40LGP29965 261 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 PPIFP30405 207 aaKnown RBP10.75□□□□□ -0.69
VPREB1-202ENST00000403807 CFHR3Q02985 330 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 FOXE3Q13461 319 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
VPREB1-202ENST00000403807 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 CADM3Q8N126 398 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 MINDY2Q8NBR6 621 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 LFNGQ8NES3 379 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 PHB2Q99623 299 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 CCDC32Q9BV29 185 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 WDR12Q9GZL7 423 aaKnown RBP10.75□□□□□ -0.69
VPREB1-202ENST00000403807 ZFP57Q9NU63 452 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 KCNIP3Q9Y2W7 256 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 FBXO7Q9Y3I1 522 aa10.75□□□□□ -0.69
VPREB1-202ENST00000403807 MSGN1A6NI15 193 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 UPK2O00526 184 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 ATG12O94817 140 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 IL6RP08887 468 aaPredicted RBP10.74□□□□□ -0.69
VPREB1-202ENST00000403807 G6PCP35575 357 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
VPREB1-202ENST00000403807 SSBP2P81877 361 aaPredicted RBP10.74□□□□□ -0.69
VPREB1-202ENST00000403807 ZNF846Q147U1 533 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 C2orf68Q2NKX9 166 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 NSUN5P1Q3KNT7 163 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 TCTEX1D4Q5JR98 221 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 TMEM65Q6PI78 240 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 SGPP2Q8IWX5 399 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 OR5M8Q8NGP6 311 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
VPREB1-202ENST00000403807 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 NAA60Q9H7X0 242 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 VSIG4Q9Y279 399 aa10.74□□□□□ -0.69
VPREB1-202ENST00000403807 A0A1W2PN81 502 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 CRYM-AS1A6NIL9 109 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 SNAPC5O75971 98 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 CHRNA7P36544 502 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 DHODHQ02127 395 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 TRIM16LQ309B1 348 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 SP6Q3SY56 376 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
VPREB1-202ENST00000403807 TSC22D3Q99576 134 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 SPIN2AQ99865 258 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 SPIN2BQ9BPZ2 258 aa10.73□□□□□ -0.69
VPREB1-202ENST00000403807 FOXA2Q9Y261 457 aaPredicted RBP10.73□□□□□ -0.69
VPREB1-202ENST00000403807 IGKV1-39P01597 117 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 IGLV1-40P01703 118 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 IGKV1D-39P04432 117 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 FGF2P09038 288 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 OR5AC1P0C628 307 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 PF4V1P10720 104 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 AKR1C4P17516 323 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 HLA-GP17693 338 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 UCP1P25874 307 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 PSMB8P28062 276 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 RPL27AP46776 148 aaKnown RBP10.72□□□□□ -0.69
VPREB1-202ENST00000403807 RAB9AP51151 201 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 RBMS2Q15434 407 aaKnown RBP10.72□□□□□ -0.69
VPREB1-202ENST00000403807 C19orf54Q5BKX5 351 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 H2BFWTQ7Z2G1 175 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 RNF152Q8N8N0 203 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 OR5T1Q8NG75 326 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 SEC22AQ96IW7 307 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 COMMD5Q9GZQ3 224 aa10.72□□□□□ -0.69
VPREB1-202ENST00000403807 TMEM222Q9H0R3 208 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms