RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 AIFM2Q9BRQ8 373 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 MED9Q9NWA0 146 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 NUP50Q9UKX7 468 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 TCF19Q9Y242 345 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 TET2Q6N021 2002 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-205ENST00000401607 S100A1P23297 94 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 MC5RP33032 325 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 VDAC2P45880 294 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-205ENST00000401607 PIMREGQ9BSJ6 248 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 MMP26Q9NRE1 261 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 KPTNQ9Y664 436 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 IGHV3-72A0A0B4J1Y9 119 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 IGHV1-3A0A0C4DH29 117 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 IGHV2-70DA0A0C4DH43 119 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 PMS2P5A8MQ11 134 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 ARG1P05089 322 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 SPP1P10451 314 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 MYOD1P15172 320 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 LRRC20Q8TCA0 184 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 SH3BGRL3Q9H299 93 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 UNKLQ9H9P5 680 aaKnown RBP20.72■□□□□ 0.91
CPNE1-205ENST00000401607 CACFD1Q9UGQ2 172 aa20.72■□□□□ 0.91
CPNE1-205ENST00000401607 STRAPQ9Y3F4 350 aaKnown RBP20.72■□□□□ 0.91
CPNE1-205ENST00000401607 ODF3BA8MYP8 253 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 VWC2LB2RUY7 222 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 IGLV2-23P01705 113 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 SEC11BP0C7V7 166 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 VMO1Q7Z5L0 202 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 MS4A7Q9GZW8 240 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-205ENST00000401607 SIRPDQ9H106 197 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 PRNDQ9UKY0 176 aa20.71■□□□□ 0.91
CPNE1-205ENST00000401607 KMT2BQ9UMN6 2715 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-205ENST00000401607 DFFBO76075 338 aa20.7■□□□□ 0.9
CPNE1-205ENST00000401607 SULT1A2P50226 295 aa20.7■□□□□ 0.9
CPNE1-205ENST00000401607 HSPE1P61604 102 aaKnown RBP20.7■□□□□ 0.9
CPNE1-205ENST00000401607 RPS16P62249 146 aaKnown RBP20.7■□□□□ 0.9
CPNE1-205ENST00000401607 RPEQ96AT9 228 aa20.7■□□□□ 0.9
CPNE1-205ENST00000401607 INSIG2Q9Y5U4 225 aa20.7■□□□□ 0.9
CPNE1-205ENST00000401607 NDUFS8O00217 210 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 KBTBD11O94819 623 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 HBG1P69891 147 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 HBG2P69892 147 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 RITA1Q96K30 269 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 OR51B2Q9Y5P1 312 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 C15orf62A8K5M9 175 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 TEX46H3BTG2 121 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 ATP6V0CP27449 155 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 TPTE2P1Q5T6R2 138 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 OR8G2PQ6IF36 304 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 REG4Q9BYZ8 158 aa20.69■□□□□ 0.9
CPNE1-205ENST00000401607 IGHV4-61A0A0C4DH41 118 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 A0A1W2PPI3 338 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 LY86O95711 162 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 HTR1DP28221 377 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 CLEC2AQ6UVW9 174 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 MOB3BQ86TA1 216 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 PERPQ96FX8 193 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 TSNAXQ99598 290 aaKnown RBP20.68■□□□□ 0.9
CPNE1-205ENST00000401607 ZNF257Q9Y2Q1 563 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 RFNGQ9Y644 331 aa20.68■□□□□ 0.9
CPNE1-205ENST00000401607 FAM157AC9JC47 383 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 FOXH1O75593 365 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 PAX1P15863 534 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 HOXB4P17483 251 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-205ENST00000401607 COL8A1P27658 744 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 SLC38A11Q08AI6 406 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 DPM3Q9P2X0 92 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 PFDN2Q9UHV9 154 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 RNASEK-C17orf49H0YIS7 233 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 FGF2P09038 288 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 HOXA1P49639 335 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-205ENST00000401607 LILRB2Q8N423 598 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 TMEM167AQ8TBQ9 72 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 CLCC1Q96S66 551 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 HIPK2Q9H2X6 1198 aa20.67■□□□□ 0.9
CPNE1-205ENST00000401607 HEYLQ9NQ87 328 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-205ENST00000401607 IGHV4-30-2A0A087WSY4 118 aa20.66■□□□□ 0.9
CPNE1-205ENST00000401607 ANKRD34BA5PLL1 514 aa20.66■□□□□ 0.9
CPNE1-205ENST00000401607 ZNF705EA8MWA4 302 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-205ENST00000401607 RUNX1Q01196 453 aa20.66■□□□□ 0.9
CPNE1-205ENST00000401607 OR4A5Q8NH83 315 aa20.66■□□□□ 0.9
CPNE1-205ENST00000401607 POLR3KQ9Y2Y1 108 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-205ENST00000401607 TEX50A0A1B0GTY4 177 aa20.65■□□□□ 0.9
CPNE1-205ENST00000401607 MFSD2BA6NFX1 497 aa20.65■□□□□ 0.9
CPNE1-205ENST00000401607 LHFPL4Q7Z7J7 247 aa20.65■□□□□ 0.9
CPNE1-205ENST00000401607 VSTM2AQ8TAG5 236 aa20.65■□□□□ 0.9
CPNE1-205ENST00000401607 A0A1W2PRD5 423 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 A0A1W2PRF3 423 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 A0A1W2PRM7 423 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 USF1P22415 310 aaPredicted RBP20.64■□□□□ 0.9
CPNE1-205ENST00000401607 LGALS7P47929 136 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 PRCDQ00LT1 54 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 TMEM170AQ8WVE7 144 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 SAT2Q96F10 170 aaPredicted RBP20.64■□□□□ 0.9
CPNE1-205ENST00000401607 TBX15Q96SF7 602 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 FKBP11Q9NYL4 201 aa20.64■□□□□ 0.9
CPNE1-205ENST00000401607 IFNA5P01569 189 aa20.64■□□□□ 0.89
CPNE1-205ENST00000401607 OPN1MWP04001 364 aa20.64■□□□□ 0.89
CPNE1-205ENST00000401607 OPN1MW2P0DN77 364 aa20.64■□□□□ 0.89
CPNE1-205ENST00000401607 OPN1MW3P0DN78 364 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms