RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
HMGA1-204ENST00000401473 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
HMGA1-204ENST00000401473 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
HMGA1-204ENST00000401473 SFT2D2O95562 160 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 IGKV1-5P01602 117 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 NDPQ00604 133 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 DHRS2Q13268 280 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 IZUMO4Q1ZYL8 232 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
HMGA1-204ENST00000401473 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 RANBP3Q9H6Z4 567 aaPredicted RBP12.59□□□□□ -0.39
HMGA1-204ENST00000401473 ZNF430Q9H8G1 570 aaPredicted RBP12.59□□□□□ -0.39
HMGA1-204ENST00000401473 SERTAD4Q9NUC0 356 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 TMEM140Q9NV12 185 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 KBTBD11O94819 623 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 NDUFA7O95182 113 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 CA2P00918 260 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 MDKP21741 143 aaPredicted RBP12.59□□□□□ -0.39
HMGA1-204ENST00000401473 RAG2P55895 527 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 UBE2MP61081 183 aaKnown RBP12.59□□□□□ -0.39
HMGA1-204ENST00000401473 PRSS8Q16651 343 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 ZNF562Q6V9R5 426 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 OR52B4Q8NGK2 314 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 MARVELD1Q9BSK0 173 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 BET1LQ9NYM9 111 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 FBXO7Q9Y3I1 522 aa12.59□□□□□ -0.39
HMGA1-204ENST00000401473 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 E7EUB6 86 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 HLA-AP01891 365 aaKnown RBP12.58□□□□□ -0.4
HMGA1-204ENST00000401473 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 C4orf46Q504U0 113 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 PLET1Q6UQ28 207 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 CASTOR1Q8WTX7 329 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 RBPMSQ93062 196 aaKnown RBP12.58□□□□□ -0.4
HMGA1-204ENST00000401473 NOL4LQ96MY1 436 aaPredicted RBP12.58□□□□□ -0.4
HMGA1-204ENST00000401473 AIFM2Q9BRQ8 373 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 TRRAPQ9Y4A5 3859 aa12.58□□□□□ -0.4
HMGA1-204ENST00000401473 P0C879 139 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
HMGA1-204ENST00000401473 MYOD1P15172 320 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 Q6ZRM9 215 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 LYG2Q86SG7 212 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 ZNF695Q8IW36 515 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 TMEM89A2RUT3 159 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 UPK2O00526 184 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 ANXA3P12429 323 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 CADM3Q8N126 398 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 OR2T6Q8NHC8 308 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 SEC22CQ9BRL7 303 aa12.57□□□□□ -0.4
HMGA1-204ENST00000401473 FAM103A1Q9BTL3 118 aaKnown RBP12.57□□□□□ -0.4
HMGA1-204ENST00000401473 INMT-MINDY4F8WBC2 141 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 DUS4LO95620 317 aaKnown RBP12.56□□□□□ -0.4
HMGA1-204ENST00000401473 PTTG1O95997 202 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 ERVK-16P61578 105 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 GNB1P62873 340 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 FXYD3Q14802 87 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 C10orf55Q5SWW7 151 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 OR4F5Q8NH21 305 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
HMGA1-204ENST00000401473 A0A0B4J293 547 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 A0A1B0GW64 132 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 ATP6V0E1O15342 81 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 OPN1MWP04001 364 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 AKR1C2P52895 323 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 RPL8P62917 257 aaKnown RBP12.55□□□□□ -0.4
HMGA1-204ENST00000401473 H2BFWTQ7Z2G1 175 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 MMD2Q8IY49 270 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 LGI3Q8N145 548 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 ANK2Q01484 3957 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 CGB1A6NKQ9 187 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 IGF1P05019 195 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 TNXAQ16473 311 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 OR4A5Q8NH83 315 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 MMP24Q9Y5R2 645 aa12.55□□□□□ -0.4
HMGA1-204ENST00000401473 VWFP04275 2813 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 CLPSL1A2RUU4 121 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 G3V318 75 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 CNIH1O95406 144 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 VDAC2P45880 294 aaPredicted RBP12.54□□□□□ -0.4
HMGA1-204ENST00000401473 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
HMGA1-204ENST00000401473 PROK1P58294 105 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 FOXL1Q12952 345 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms