RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 ERVK-16P61578 105 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 SSX2Q16385 188 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 AARDQ4LEZ3 155 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 KLF17Q5JT82 389 aaPredicted RBP4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 PPP1R1CQ8WVI7 109 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 C17orf50Q8WW18 174 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 GPR146Q96CH1 333 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 FLYWCH2Q96CP2 140 aaKnown RBP4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 R3HDM4Q96D70 268 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 AIFM2Q9BRQ8 373 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 CHIAQ9BZP6 476 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 RANBP3Q9H6Z4 567 aaPredicted RBP4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 HILPDAQ9Y5L2 63 aa4.43□□□□□ -1.7
SAMSN1-203ENST00000400566 ZNF469Q96JG9 3925 aaPredicted RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 RGS13O14921 159 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 VENTXO95231 258 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 C1QBP02746 253 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 IL6RP08887 468 aaPredicted RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 FGL1Q08830 312 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 SMCO1Q147U7 214 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 Q5BKY6 102 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 THOC7Q6I9Y2 204 aaKnown RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 Q6ZRM9 215 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 H2BFWTQ7Z2G1 175 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 MOB3BQ86TA1 216 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 WFDC3Q8IUB2 231 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 PUSL1Q8N0Z8 303 aaKnown RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 DYNAPQ8N1N2 210 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 DMBX1Q8NFW5 382 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 OR4D5Q8NGN0 318 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 HARBI1Q96MB7 349 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 RNF5Q99942 180 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 MS4A7Q9GZW8 240 aaPredicted RBP4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 CACNG5Q9UF02 275 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 MTORP42345 2549 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 CELSR1Q9NYQ6 3014 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 HIVEP2P31629 2446 aa4.42□□□□□ -1.7
SAMSN1-203ENST00000400566 TRAV14DV4A0A0A6YYC5 116 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SRRM4A7MD48 611 aaKnown RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 FAM90A26D6RGX4 464 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 BOLA2-SMG1P6H3BVE0 249 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SHOXO15266 292 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 MPC2O95563 127 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 IGLV2-23P01705 113 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 HNRNPCP07910 306 aaKnown RBP eCLIP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 FGF2P09038 288 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SAA1P0DJI8 122 aaPredicted RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 PSMB6P28072 239 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 DYNLT3P51808 116 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 UBE2KP61086 200 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 RPS16P62249 146 aaKnown RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 RAB32Q13637 225 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 EBI3Q14213 229 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 IZUMO4Q1ZYL8 232 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 ZFP69Q49AA0 526 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 RUSC1-AS1Q66K80 236 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 OR4A47Q6IF82 309 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 BRD3OSQ6XYD6 125 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 FOXRED2Q8IWF2 684 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 VKORC1L1Q8N0U8 176 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 VSTM2AQ8TAG5 236 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 HYLS1Q96M11 299 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 MEGF9Q9H1U4 602 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 ZFP57Q9NU63 452 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 TMEM140Q9NV12 185 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 BET1LQ9NYM9 111 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 GSKIPQ9P0R6 139 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 CACFD1Q9UGQ2 172 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 IGHV3OR16-10A0A075B7F0 116 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 A0A0U1RQK1 487 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SMLR1H3BR10 107 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SMAD7O15105 426 aaKnown RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 ST8SIA3O43173 380 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 KBTBD11O94819 623 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SPDEFO95238 335 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 MOSP00540 346 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 IGKV1D-33P01593 117 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 IGKV1-33P01594 117 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 MBPP02686 304 aaPredicted RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 OR9G9P0C7N8 305 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 PET100P0DJ07 73 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SLC25A4P12235 298 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 LYL1P12980 280 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 PAX6P26367 422 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 BRS3P32247 399 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 NKX2-1P43699 371 aaPredicted RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 AANATQ16613 207 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 VMA21Q3ZAQ7 101 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 LRRC37A5PQ49AS3 106 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 PDLIM3Q53GG5 364 aaPredicted RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 CXorf66Q5JRM2 361 aaPredicted RBP4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 C11orf87Q6NUJ2 197 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 SSX9Q7RTT3 188 aa4.41□□□□□ -1.7
SAMSN1-203ENST00000400566 NOXA1Q86UR1 476 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms