RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 CEP295Q9C0D2 2601 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 A0A1W2PPE2 198 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 IGKV1D-33P01593 117 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 IGKV1-33P01594 117 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 SFTPCP11686 197 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 ELLP55199 621 aaPredicted RBP12.92□□□□□ -0.34
CDC42-203ENST00000400259 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 VKORC1L1Q8N0U8 176 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
CDC42-203ENST00000400259 CYB561D1Q8N8Q1 229 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 NPCDR1Q9BY65 106 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 GNG13Q9P2W3 67 aa12.92□□□□□ -0.34
CDC42-203ENST00000400259 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDC42-203ENST00000400259 DCHS1Q96JQ0 3298 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 C15orf61A6NNL5 157 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 E7EQL1 145 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 IGHV2-70P01814 119 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 NDUFB7P17568 137 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 CEBPGP53567 150 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 EFNB3Q15768 340 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 FBXL19-AS1Q494R0 122 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 ZCCHC14Q8WYQ9 949 aaKnown RBP12.91□□□□□ -0.34
CDC42-203ENST00000400259 TMEM106BQ9NUM4 274 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 FOXA2Q9Y261 457 aaPredicted RBP12.91□□□□□ -0.34
CDC42-203ENST00000400259 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 H3BQ15 152 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 GFRA3O60609 400 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 FCN3O75636 299 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 TFF3Q07654 80 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 RHOVQ96L33 236 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 P2RX4Q99571 388 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 TMEM14BQ9NUH8 114 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 TCF19Q9Y242 345 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 WDR83OSQ9Y284 106 aa12.91□□□□□ -0.34
CDC42-203ENST00000400259 POLEQ07864 2286 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
CDC42-203ENST00000400259 CA7P43166 264 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 RPL31P62899 125 aaKnown RBP12.9□□□□□ -0.34
CDC42-203ENST00000400259 OR4A47Q6IF82 309 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 HEPN1Q6WQI6 88 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 MS4A5Q9H3V2 200 aa12.9□□□□□ -0.34
CDC42-203ENST00000400259 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.35
CDC42-203ENST00000400259 CTXND1A0A1B0GTU2 59 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 hCG_1809904A0A1W2PP81 198 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 A0A1W2PR64 198 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 A0A1W2PRV1 198 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 C17orf112F2Z3M2 114 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 SOX15O60248 233 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 HRASP01112 189 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 IFNA1P01562 189 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 GNG10P50151 68 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.35
CDC42-203ENST00000400259 CASP6P55212 293 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 HNF4GQ14541 408 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 Q8N7P7 452 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 SLC39A9Q9NUM3 307 aa12.9□□□□□ -0.35
CDC42-203ENST00000400259 MPDU1O75352 247 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 MT-ND4LP03901 98 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 CD1BP29016 333 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
CDC42-203ENST00000400259 RNF212Q495C1 297 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 FAM24BQ8N5W8 94 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 ZNF714Q96N38 554 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 DYNLRB1Q9NP97 96 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 HEYLQ9NQ87 328 aaPredicted RBP12.89□□□□□ -0.35
CDC42-203ENST00000400259 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 KAAG1Q9UBP8 84 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 VAX2Q9UIW0 290 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 KALRNO60229 2985 aa12.89□□□□□ -0.35
CDC42-203ENST00000400259 ZFP92A6NM28 416 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 IFNA10P01566 189 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 RPS16P62249 146 aaKnown RBP12.88□□□□□ -0.35
CDC42-203ENST00000400259 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 FAM90A2PQ658T7 463 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CCL17Q92583 94 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 LHX4Q969G2 390 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 A0A087WWC5 75 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CLN5O75503 358 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 CD3EP07766 207 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 MAS1LP35410 378 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
CDC42-203ENST00000400259 DLK1P80370 383 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 C8orf31Q8N9H6 132 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 OR10G9Q8NGN4 311 aa12.88□□□□□ -0.35
CDC42-203ENST00000400259 OR10G7Q8NGN6 311 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms