RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FAM201AQ5SY85 155 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 RBPMS2Q6ZRY4 209 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 PPP1R32Q7Z5V6 425 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MRPL30Q8TCC3 161 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 NEU1Q99519 415 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 ALX4Q9H161 411 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 NPDC1Q9NQX5 325 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 CALYQ9NYX4 217 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 IGHV3OR16-10A0A075B7F0 116 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 IGSF23A1L1A6 192 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 NPIPB13A6NJU9 1138 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 NPIPB4C9JG80 1138 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 ZG16O60844 167 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MELTFP08582 738 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 SEC11BP0C7V7 166 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HIST1H1EP10412 219 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 MEOX2P50222 304 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 ZP1P60852 638 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 BSPH1Q075Z2 132 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 FAM27E3Q08E93 113 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HIST3H3Q16695 136 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 GTF2H5Q6ZYL4 71 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 GBGT1Q8N5D6 347 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 OR5AU1Q8NGC0 362 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 LINC01560Q8TB33 94 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 TMEM54Q969K7 222 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 LOXL4Q96JB6 756 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 QTRT1Q9BXR0 403 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 ZNF716A6NP11 495 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 SYNGR3O43761 229 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 RAMP3O60896 148 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HPRT1P00492 218 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 CD1AP06126 327 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 ZNF735P0CB33 412 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 PF4V1P10720 104 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 EGR1P18146 543 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 TFPI2P48307 235 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 FAM3BP58499 235 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 PAFAH1B2P68402 229 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MEF2BQ02080 365 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 FAM209AQ5JX71 171 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 SPANXN1Q5VSR9 72 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MIC13Q5XKP0 118 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HSD17B13Q7Z5P4 300 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 NR2C2APQ86WQ0 139 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 SELENOHQ8IZQ5 122 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 DRAM1Q8N682 238 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 PGLYRP4Q96LB8 373 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 P2RX4Q99571 388 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 IFT22Q9H7X7 185 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MFSD2BA6NFX1 497 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 C9orf172C9J069 976 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 GFRA3O60609 400 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 IGHV1-2P23083 117 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 CCKARP32238 428 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 TNFSF10P50591 281 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 GFRA1P56159 465 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 RPS11P62280 158 aaKnown RBP eCLIP2.77□□□□□ -1.97
KNL1-202ENST00000399668 HOXA4Q00056 320 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 FXYD3Q14802 87 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HLA-DRB5Q30154 266 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 NHLRC3Q5JS37 347 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 DIRC2Q96SL1 478 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 BET1LQ9NYM9 111 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 S4R3C0 116 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 TNRC18O15417 2968 aaPredicted RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 IGHV3-49A0A0A0MS15 119 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 OR4C46A6NHA9 309 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 H0YL77 283 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 MGST3O14880 152 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 OR2A4O95047 310 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 FAM106CPP0CH98 169 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HOXA6P31267 233 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 PSG7Q13046 419 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 RIGQ13278 110 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 KIAA1644Q3SXP7 199 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 C1orf100Q5SVJ3 147 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 DPPA3Q6W0C5 159 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 RAB24Q969Q5 203 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 GPR146Q96CH1 333 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 SNRNP40Q96DI7 357 aaKnown RBP2.77□□□□□ -1.97
KNL1-202ENST00000399668 AQP10Q96PS8 301 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 OR2A7Q96R45 310 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 HEXA-AS1Q9H8Q6 139 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 PITPNC1Q9UKF7 332 aa2.77□□□□□ -1.97
KNL1-202ENST00000399668 TRBV23-1A0A0A0MS06 115 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 A1L4Q6 167 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 NPIPB9F8W1W9 429 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 CECR9P0C854 216 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 SFTPCP11686 197 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 LHX2P50458 406 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 CFHR1Q03591 330 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 LY6EQ16553 131 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 TM4SF20Q53R12 229 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 RPL39P5Q59GN2 51 aa2.76□□□□□ -1.97
KNL1-202ENST00000399668 ZNF362Q5T0B9 420 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms