RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 SORL1Q92673 2214 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 H0YL77 283 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
TNRC18-203ENST00000399537 SONP18583 2426 aaKnown RBP12.39□□□□□ -0.43
TNRC18-203ENST00000399537 TRBV5-5A0A0J9YX44 114 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 UCNP55089 124 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 ZNF414Q96IQ9 312 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 CBLN4Q9NTU7 201 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
TNRC18-203ENST00000399537 TLNRD1Q9H1K6 362 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 TANC2Q9HCD6 1990 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 IGKV1D-16P01601 117 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
TNRC18-203ENST00000399537 ATP5J2P56134 94 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 FCARP24071 287 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 SFRP2Q96HF1 295 aa12.39□□□□□ -0.43
TNRC18-203ENST00000399537 TRBV9A0A0B4J1U6 114 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 A0A1W2PPV9 198 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 H3BTX0 84 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 WISP3O95389 354 aaPredicted RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 MPV17P39210 176 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 VKORC1L1Q8N0U8 176 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 SOX21Q9Y651 276 aaPredicted RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 FOXI3A8MTJ6 420 aaPredicted RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 HIST1H1AQ02539 215 aaPredicted RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 IDI2-AS1Q9NZ38 188 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 TMEM229AB2RXF0 380 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 NDUFS8O00217 210 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 EEF1AKMT3Q96AZ1 226 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 SIP14410 1827 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 TNFRSF9Q07011 255 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 ODAMA1E959 279 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 PF4P02776 101 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 FHITP49789 147 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 PSG4Q00888 419 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 H2BFSP57053 126 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 COL4A1P02462 1669 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 B4E171 279 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 TSPAN7P41732 249 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 PEBP1P30086 187 aaKnown RBP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 RPS11P62280 158 aaKnown RBP eCLIP12.38□□□□□ -0.43
TNRC18-203ENST00000399537 TAF15Q92804 592 aaKnown RBP eCLIP12.38□□□□□ -0.434e-6■■□□□ 11.5
TNRC18-203ENST00000399537 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 CELA2AP08217 269 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 PAPPA-AS1Q5QFB9 102 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 GOLT1AQ6ZVE7 132 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 CLEC7AQ9BXN2 247 aa12.38□□□□□ -0.43
TNRC18-203ENST00000399537 ZNF826PQ6ZT77 177 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 IL11P20809 199 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 STARD6P59095 220 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 PRELID3AQ96N28 172 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 PGPA6NDG6 321 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 ASAH2BP0C7U1 165 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 SELENOHQ8IZQ5 122 aaKnown RBP12.37□□□□□ -0.43
TNRC18-203ENST00000399537 TUBA4BQ9H853 241 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 CEACAM4O75871 244 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 LINC00470Q9BZP3 86 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 LIMS1P48059 325 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 OR51G1Q8NGK1 321 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 C5orf66Q9H5L9 145 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 LOC105371242A0A075B767 164 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 LINC00518Q8N0U6 118 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 IGHV1-45A0A0A0MS14 117 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 NPIPB8E9PQR5 432 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 ZNHIT1O43257 154 aa12.37□□□□□ -0.43
TNRC18-203ENST00000399537 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 MBD3L1Q8WWY6 194 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 RNF115Q9Y4L5 304 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 MPTX1A8MV57 137 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 C1QCP02747 245 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 FGF5P12034 268 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 EML6Q6ZMW3 1958 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 GRIFINA4D1Z8 144 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 BIVMQ86UB2 503 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 A0A1B0GV90 55 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 DMRT1Q9Y5R6 373 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 A0A1W2PQM1 296 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 NPIPB11E5RHQ5 1161 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 MED12LQ86YW9 2145 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 AGAP20933 346 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 PCSK4Q6UW60 755 aa12.36□□□□□ -0.43
TNRC18-203ENST00000399537 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
TNRC18-203ENST00000399537 PATE3B3GLJ2 98 aa12.35□□□□□ -0.43
TNRC18-203ENST00000399537 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
TNRC18-203ENST00000399537 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms