RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 SFTA2Q6UW10 78 aa13.76□□□□□ -0.21
ITSN1-209ENST00000399352 LINC00305Q7Z4B0 112 aa13.76□□□□□ -0.21
ITSN1-209ENST00000399352 NEUROG1Q92886 237 aa13.76□□□□□ -0.21
ITSN1-209ENST00000399352 TRAV14DV4A0A0A6YYC5 116 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 hCG_38984A0A1B0GV85 526 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 C19orf67A6NJJ6 358 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 ADRA2AP08913 450 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 RSPO4Q2I0M5 234 aaPredicted RBP13.75□□□□□ -0.21
ITSN1-209ENST00000399352 TCF23Q7RTU1 214 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 IDI2-AS1Q9NZ38 188 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 DDB2Q92466 427 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 FOXC2Q99958 501 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 MRPL32Q9BYC8 188 aaKnown RBP13.75□□□□□ -0.21
ITSN1-209ENST00000399352 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 PILRAQ9UKJ1 303 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 SFXN3Q9BWM7 321 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 PKIBQ9C010 78 aa13.75□□□□□ -0.21
ITSN1-209ENST00000399352 PSMB11A5LHX3 300 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 GATAD1Q8WUU5 269 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 C19orf24Q9BVV8 132 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 FNDC4Q9H6D8 234 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-209ENST00000399352 JKAMPQ9P055 326 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 RRN3P1Q2M238 152 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 NRN1Q9NPD7 142 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 A0A1W2PS18 150 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 ICAM4Q14773 271 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
ITSN1-209ENST00000399352 C1QL2Q7Z5L3 287 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 CLDND2Q8NHS1 167 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 MDC1Q14676 2089 aaKnown RBP13.74□□□□□ -0.21
ITSN1-209ENST00000399352 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 A0A087WWC5 75 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 SUMO2P61956 95 aaKnown RBP13.74□□□□□ -0.21
ITSN1-209ENST00000399352 TBR1Q16650 682 aa13.74□□□□□ -0.21
ITSN1-209ENST00000399352 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 A0A0G2JK05 382 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 LINC00614P0C842 121 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 ZNF501Q96CX3 271 aaPredicted RBP13.73□□□□□ -0.21
ITSN1-209ENST00000399352 CACNA1IQ9P0X4 2223 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 C21orf140B9A014 251 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 MESP2Q0VG99 397 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 COPS9Q8WXC6 57 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 KIAA1551Q9HCM1 1747 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 LDLRAD2Q5SZI1 272 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 LRP5O75197 1615 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 ALPK2Q86TB3 2170 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 A6NNC1 897 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 FBLN7Q53RD9 439 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 PCSK4Q6UW60 755 aa13.73□□□□□ -0.21
ITSN1-209ENST00000399352 ACSF3Q4G176 576 aaPredicted RBP13.72□□□□□ -0.21
ITSN1-209ENST00000399352 PMS2CLQ68D20 193 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 FAM214BQ7L5A3 538 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 GPR183P32249 361 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 GPX4P36969 197 aaPredicted RBP13.72□□□□□ -0.21
ITSN1-209ENST00000399352 JPT1Q9UK76 154 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 RTTNQ86VV8 2226 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 FAM106CPP0CH98 169 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 ZNF146Q15072 292 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
ITSN1-209ENST00000399352 MRPS16Q9Y3D3 137 aaKnown RBP13.72□□□□□ -0.21
ITSN1-209ENST00000399352 ZNFX1Q9P2E3 1918 aaKnown RBP13.71□□□□□ -0.21
ITSN1-209ENST00000399352 M0R381 172 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 IGFBP2P18065 325 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 RPL23P62829 140 aaKnown RBP13.71□□□□□ -0.21
ITSN1-209ENST00000399352 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 RTBDNQ9BSG5 229 aaPredicted RBP13.71□□□□□ -0.21
ITSN1-209ENST00000399352 PATE3B3GLJ2 98 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BKO60814 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BJP06899 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BOP23527 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BBP33778 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BDP58876 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BCP62807 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST2H2BEQ16778 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.71□□□□□ -0.21
ITSN1-209ENST00000399352 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BHQ93079 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BNQ99877 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 HIST1H2BMQ99879 126 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 WNT9BO14905 357 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 IGKV3-20P01619 116 aa13.71□□□□□ -0.21
ITSN1-209ENST00000399352 TRAV8-2A0A0B4J237 113 aa13.71□□□□□ -0.22
ITSN1-209ENST00000399352 NBEAP1P0C6P0 100 aa13.71□□□□□ -0.22
ITSN1-209ENST00000399352 C9JCJ5 164 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 ADMP35318 185 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 SAXO1Q8IYX7 474 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 C5orf30Q96GV9 206 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 SFTPCP11686 197 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 MAFAQ8NHW3 353 aaPredicted RBP13.7□□□□□ -0.22
ITSN1-209ENST00000399352 NHP2Q9NX24 153 aaKnown RBP13.7□□□□□ -0.22
ITSN1-209ENST00000399352 A0A1B0GUT8 65 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 PROB1E7EW31 1015 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 NDUFA3O95167 84 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
ITSN1-209ENST00000399352 C10orf128Q5T292 105 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
ITSN1-209ENST00000399352 SCGB3A1Q96QR1 104 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms