RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 HLA-DRB1P01911 266 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 MIC13Q5XKP0 118 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 MESP1Q9BRJ9 268 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 CEP250Q9BV73 2442 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 MED12Q93074 2177 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 OR5A1Q8NGJ0 315 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 PEF1Q9UBV8 284 aaKnown RBP8.01□□□□□ -1.13
ATL3-201ENST00000398868 CACFD1Q9UGQ2 172 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 RND3P61587 244 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 PPP1R32Q7Z5V6 425 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 SRSF12Q8WXF0 261 aaKnown RBP8.01□□□□□ -1.13
ATL3-201ENST00000398868 C7orf69Q9H7B7 122 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 OGG1O15527 345 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 CELA3BP08861 270 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 GP6Q9HCN6 339 aa8.01□□□□□ -1.13
ATL3-201ENST00000398868 ZNF236Q9UL36 1845 aa8□□□□□ -1.13
ATL3-201ENST00000398868 QSER1Q2KHR3 1735 aa8□□□□□ -1.13
ATL3-201ENST00000398868 CEACAM18A8MTB9 384 aa8□□□□□ -1.13
ATL3-201ENST00000398868 H3BUT2 72 aa8□□□□□ -1.13
ATL3-201ENST00000398868 COX6A1P12074 109 aa8□□□□□ -1.13
ATL3-201ENST00000398868 CRYBB3P26998 211 aa8□□□□□ -1.13
ATL3-201ENST00000398868 FUT5Q11128 374 aa8□□□□□ -1.13
ATL3-201ENST00000398868 P2RY6Q15077 328 aa8□□□□□ -1.13
ATL3-201ENST00000398868 OR10J6PQ8NGY7 276 aa8□□□□□ -1.13
ATL3-201ENST00000398868 PGPA6NDG6 321 aa8□□□□□ -1.13
ATL3-201ENST00000398868 SLC17A3O00476 420 aa8□□□□□ -1.13
ATL3-201ENST00000398868 BGLAPP02818 100 aa8□□□□□ -1.13
ATL3-201ENST00000398868 SEC11BP0C7V7 166 aa8□□□□□ -1.13
ATL3-201ENST00000398868 STARD6P59095 220 aa8□□□□□ -1.13
ATL3-201ENST00000398868 NAA38Q9BRA0 125 aaKnown RBP8□□□□□ -1.13
ATL3-201ENST00000398868 CCL27Q9Y4X3 112 aa8□□□□□ -1.13
ATL3-201ENST00000398868 ZNF646O15015 1829 aaPredicted RBP8□□□□□ -1.13
ATL3-201ENST00000398868 PRR33A8MZF0 331 aa8□□□□□ -1.13
ATL3-201ENST00000398868 LDLRAD2Q5SZI1 272 aa8□□□□□ -1.13
ATL3-201ENST00000398868 H1FOOQ8IZA3 346 aaPredicted RBP8□□□□□ -1.13
ATL3-201ENST00000398868 FAM168AQ92567 244 aa8□□□□□ -1.13
ATL3-201ENST00000398868 HIGD1AQ9Y241 93 aa8□□□□□ -1.13
ATL3-201ENST00000398868 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
ATL3-201ENST00000398868 HOXC4P09017 264 aaPredicted RBP8□□□□□ -1.13
ATL3-201ENST00000398868 GALP22466 123 aa8□□□□□ -1.13
ATL3-201ENST00000398868 GLIPR1P48060 266 aa8□□□□□ -1.13
ATL3-201ENST00000398868 PRSS53Q2L4Q9 553 aa8□□□□□ -1.13
ATL3-201ENST00000398868 MRAP2Q96G30 205 aa8□□□□□ -1.13
ATL3-201ENST00000398868 C4orf51C9J302 202 aa8□□□□□ -1.13
ATL3-201ENST00000398868 MOSP00540 346 aa8□□□□□ -1.13
ATL3-201ENST00000398868 ZNF124Q15973 351 aa8□□□□□ -1.13
ATL3-201ENST00000398868 PRR31Q5SQ13 230 aa8□□□□□ -1.13
ATL3-201ENST00000398868 KLF14Q8TD94 323 aaPredicted RBP8□□□□□ -1.13
ATL3-201ENST00000398868 HSPB7Q9UBY9 170 aa8□□□□□ -1.13
ATL3-201ENST00000398868 FANCMQ8IYD8 2048 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 NPIPB8E9PQR5 432 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 NPIPB9F8W1W9 429 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 NPIPB7O75200 414 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 H2BFSP57053 126 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 COL18A1P39060 1754 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 ZG16O60844 167 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 NANOS3P60323 173 aaKnown RBP7.99□□□□□ -1.13
ATL3-201ENST00000398868 C1orf53Q5VUE5 145 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 MTURNQ8N3F0 131 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 OR5AN1Q8NGI8 311 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 AMELYQ99218 206 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 NPFFR1Q9GZQ6 430 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 USP54Q70EL1 1684 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 ARAP2Q8WZ64 1704 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 GVINP1Q7Z2Y8 2422 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 TBX6O95947 436 aaPredicted RBP7.99□□□□□ -1.13
ATL3-201ENST00000398868 DNAL4O96015 105 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATL3-201ENST00000398868 TMEM170BQ5T4T1 132 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 LINC00614P0C842 121 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 SRSF4Q08170 494 aaKnown RBP7.99□□□□□ -1.13
ATL3-201ENST00000398868 GALNT14Q96FL9 552 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 CALYQ9NYX4 217 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 A8MWL6 223 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 RAMP1O60894 148 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 GNLYP22749 145 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 ATP5G2Q06055 141 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 ZNF56Q15929 161 aa7.99□□□□□ -1.13
ATL3-201ENST00000398868 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
ATL3-201ENST00000398868 TRGV3P03979 118 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 ZNF345Q14585 488 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 OR1L8Q8NGR8 309 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 TCF23Q7RTU1 214 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 GDF15Q99988 308 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 JKAMPQ9P055 326 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
ATL3-201ENST00000398868 PLAC1Q9HBJ0 212 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 MEF2BQ02080 365 aaPredicted RBP7.98□□□□□ -1.13
ATL3-201ENST00000398868 RNASEH2CQ8TDP1 164 aaKnown RBP7.98□□□□□ -1.13
ATL3-201ENST00000398868 IGKV1D-33P01593 117 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 IGKV1-33P01594 117 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 GZMHP20718 246 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 TNFSF10P50591 281 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
ATL3-201ENST00000398868 ABCA4P78363 2273 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms