RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ASCL2Q99929 193 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 COLQQ9Y215 455 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 K7ERU9 68 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 SFTA3P0C7M3 94 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 ELLP55199 621 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 ZP1P60852 638 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 LHFPL4Q7Z7J7 247 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 CNRIP1Q96F85 164 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 MGST2Q99735 147 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 HAPLN2Q9GZV7 340 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 AKIRIN1Q9H9L7 192 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 SEMA5BQ9P283 1151 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 EMCNQ9ULC0 261 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 A0A1B0GTH9 108 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 RFPL4AA6NLU0 287 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 RFPL4AL1F8VTS6 287 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 NBR2O15453 112 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 TCF21O43680 179 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 VENTXO95231 258 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 IGHV4-34P06331 123 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 ZNF708P17019 499 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 EFNA4P52798 201 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 SRSF5Q13243 272 aaKnown RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 LTC4SQ16873 150 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 WDR38Q5JTN6 314 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 LYPD1Q8N2G4 141 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 WDR89Q96FK6 387 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 DNAJC30Q96LL9 226 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 DMRTA2Q96SC8 542 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 CITED1Q99966 193 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 GAB2Q9UQC2 676 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 MSRB2Q9Y3D2 182 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 A0A1B0GWB2 263 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 NDUFA4O00483 81 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 DKK1O94907 266 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 DAPP51397 102 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 GAB4Q2WGN9 574 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 C11orf87Q6NUJ2 197 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 LINC00052Q96N35 136 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 SMPXQ9UHP9 88 aa2.34□□□□□ -2.03
CHD9-202ENST00000398510 FLG2Q5D862 2391 aaPredicted RBP2.34□□□□□ -2.03
CHD9-202ENST00000398510 C9JCJ5 164 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 MPZL1O95297 269 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 CD8AP01732 235 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 INSL3P51460 131 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 FZD5Q13467 585 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 MRPL14Q6P1L8 145 aaKnown RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 OR4X1Q8NH49 305 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 ZNF501Q96CX3 271 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 NXT2Q9NPJ8 142 aaKnown RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 JKAMPQ9P055 326 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 ANKRD65E5RJM6 399 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 NDUFB8O95169 186 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 GZMBP10144 247 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 LPAR6P43657 344 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 LCN2P80188 198 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 IFITM3Q01628 133 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 GPNMBQ14956 572 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 KLF17Q5JT82 389 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 ATG4DQ86TL0 474 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 GATAD1Q8WUU5 269 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 ZNF778Q96MU6 729 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 IMMP2LQ96T52 175 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 TRAF4Q9BUZ4 470 aaPredicted RBP2.34□□□□□ -2.04
CHD9-202ENST00000398510 TMEM238C9JI98 176 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 WNT2P09544 360 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 COX6A1P12074 109 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 CD69Q07108 199 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 C14orf177Q52M58 125 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 C9orf50Q5SZB4 431 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 DLEU7Q6UYE1 221 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 ATP5L2Q7Z4Y8 100 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 RIMKLAQ8IXN7 391 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 OR4C5Q8NGB2 326 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 SFRP2Q96HF1 295 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 MTFP1Q9UDX5 166 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 GPR132Q9UNW8 380 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 PRSS21Q9Y6M0 314 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 DSCAML1Q8TD84 2053 aa2.34□□□□□ -2.04
CHD9-202ENST00000398510 H3BMH7 237 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CLLU1Q5K131 121 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 RPL36A-HNRNPH2H7BZ11 118 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 RHODO00212 210 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CTLA4P16410 223 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMEM155Q4W5P6 130 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TMEM256Q8N2U0 113 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 SIGLEC11Q96RL6 698 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 TNFSF12O43508 249 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 NAPSAO96009 420 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 CA2P00918 260 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 STPG2Q8N412 459 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR10G4Q8NGN3 311 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR10G9Q8NGN4 311 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 OR10G7Q8NGN6 311 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 AQP3Q92482 292 aa2.33□□□□□ -2.04
CHD9-202ENST00000398510 GDF15Q99988 308 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms