RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MFFQ9GZY8 342 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 SLC25A31Q9H0C2 315 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 MEGF9Q9H1U4 602 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 TMEM14BQ9NUH8 114 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 ITGB1BP2Q9UKP3 347 aa15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 LSM5Q9Y4Y9 91 aaKnown RBP15.33■□□□□ 0.05
TSPAN4-204ENST00000397404 UPK2O00526 184 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 ARPC5O15511 151 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 VENTXO95231 258 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 DLX1P56177 255 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 RPL23AP62750 156 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 RELBQ01201 579 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 SSX2Q16385 188 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 C9orf62Q8N4C0 152 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 C1RLQ9NZP8 487 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 RCL1Q9Y2P8 373 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 HILPDAQ9Y5L2 63 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 CSMD2Q7Z408 3487 aa15.33■□□□□ 0.04
TSPAN4-204ENST00000397404 ITPR2Q14571 2701 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 TSC22D2O75157 780 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 SAA1P0DJI8 122 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 BAXQ07812 192 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 LHFPL4Q7Z7J7 247 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 SMIM8Q96KF7 97 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 KIAA1456Q9P272 454 aa15.32■□□□□ 0.04
TSPAN4-204ENST00000397404 HECTD1Q9ULT8 2610 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 TRAV40A0A0B4J280 105 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 H0YIZ8 118 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 TAAR5O14804 337 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 S100A11P31949 105 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 HSPE1P61604 102 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 RPL8P62917 257 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 CXorf66Q5JRM2 361 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 LDLRAD2Q5SZI1 272 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 SSX9Q7RTT3 188 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 MMD2Q8IY49 270 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 NPBQ8NG41 125 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 NANPQ8TBE9 248 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 LYRM2Q9NU23 88 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 HSPB11Q9Y547 144 aa15.31■□□□□ 0.04
TSPAN4-204ENST00000397404 MAP1AP78559 2803 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 INS-IGF2F8WCM5 200 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 CHST1O43916 411 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 IFNA17P01571 189 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 IGLV2-23P01705 113 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 FBP1P09467 338 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 OR9G9P0C7N8 305 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 POLR2GP62487 172 aaKnown RBP eCLIP15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 KCNRGQ8N5I3 272 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 WFDC11Q8NEX6 87 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 GON7Q9BXV9 100 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 HIPK2Q9H2X6 1198 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 OR5AC2Q9NZP5 309 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 NUP50Q9UKX7 468 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 FAM96BQ9Y3D0 163 aa15.3■□□□□ 0.04
TSPAN4-204ENST00000397404 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 RPL12P30050 165 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 LGALSLQ3ZCW2 172 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 C9orf139Q6ZV77 190 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 HSD17B13Q7Z5P4 300 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 PDZD9Q8IXQ8 264 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 OR2C3Q8N628 320 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 COMMD5Q9GZQ3 224 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 C11orf1Q9H5F2 150 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 PDZD2O15018 2839 aa15.29■□□□□ 0.04
TSPAN4-204ENST00000397404 SSSCA1O60232 199 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 NDUFA3O95167 84 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 SNRNP70P08621 437 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 NKX2-5P52952 324 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 PRB3Q04118 309 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 STX12Q86Y82 276 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 VKORC1L1Q8N0U8 176 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 OR1L8Q8NGR8 309 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 DTD1Q8TEA8 209 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 SRSF8Q9BRL6 282 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 ENY2Q9NPA8 101 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 OR51B2Q9Y5P1 312 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 CCDC168Q8NDH2 2452 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 CR1P17927 2039 aa15.28■□□□□ 0.04
TSPAN4-204ENST00000397404 A0A1W2PN81 502 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 KANTRA0A1W2PQU2 76 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 RNF222A6NCQ9 220 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 NBR2O15453 112 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 ACTL6BO94805 426 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 IGKV1D-33P01593 117 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 IGKV1-33P01594 117 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 CHRNA7P36544 502 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 EIF5AP63241 154 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 PRCDQ00LT1 54 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 PSG5Q15238 335 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 LAMTOR1Q6IAA8 161 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 PPP1R27Q86WC6 154 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 GRPEL2Q8TAA5 225 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 AJUBAQ96IF1 538 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 EAF1Q96JC9 268 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 ARL6Q9H0F7 186 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 SIGLEC9Q9Y336 463 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 U3KQ87 197 aa15.27■□□□□ 0.04
TSPAN4-204ENST00000397404 IGHV3-72A0A0B4J1Y9 119 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms