RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 C2orf68Q2NKX9 166 aa23.07■■□□□ 1.28
CHCHD4-202ENST00000396914 NDUFA11Q86Y39 141 aa23.07■■□□□ 1.28
CHCHD4-202ENST00000396914 LFNGQ8NES3 379 aa23.07■■□□□ 1.28
CHCHD4-202ENST00000396914 ZNF580Q9UK33 172 aa23.07■■□□□ 1.28
CHCHD4-202ENST00000396914 A0A1W2PN81 502 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 CHRNA7P36544 502 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 ZNF585BQ52M93 769 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 CXorf66Q5JRM2 361 aaPredicted RBP23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 OR4A47Q6IF82 309 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 PUSL1Q8N0Z8 303 aaKnown RBP23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 SCGB3A2Q96PL1 93 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 SDHCQ99643 169 aaPredicted RBP23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 AKIP1Q9NQ31 210 aa23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 TSSC4Q9Y5U2 329 aaPredicted RBP23.06■■□□□ 1.28
CHCHD4-202ENST00000396914 TEX13DA0A0J9YY54 714 aaPredicted RBP23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 KRASP01116 189 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 EGR2P11161 476 aaPredicted RBP23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 TMEM65Q6PI78 240 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 LINC00299Q6ZSB3 139 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 TMEM167AQ8TBQ9 72 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 DEDD2Q8WXF8 326 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 S100ZQ8WXG8 99 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 PLXNB1O43157 2135 aa23.05■■□□□ 1.28
CHCHD4-202ENST00000396914 C3orf85A0A1B0GTC6 90 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 G6PCP35575 357 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 CFHR3Q02985 330 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 MRGPRG-AS1Q2M3A8 158 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 LCNL1Q6ZST4 164 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 RTBDNQ9BSG5 229 aaPredicted RBP23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 TMEM140Q9NV12 185 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 GPR132Q9UNW8 380 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 FOXA2Q9Y261 457 aaPredicted RBP23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 NUBP2Q9Y5Y2 271 aa23.04■■□□□ 1.28
CHCHD4-202ENST00000396914 MARCH11A6NNE9 402 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 APELAP0DMC3 54 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 PF4V1P10720 104 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 IL7P13232 177 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 SSBP2P81877 361 aaPredicted RBP23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 FOXE3Q13461 319 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 OR4A5Q8NH83 315 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 SRSF12Q8WXF0 261 aaKnown RBP23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 C5orf66Q9H5L9 145 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 BET1LQ9NYM9 111 aa23.03■■□□□ 1.28
CHCHD4-202ENST00000396914 MSGN1A6NI15 193 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 H0Y980 276 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 IGHG4P01861 327 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 ELANEP08246 267 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 CRIP2P52943 208 aaPredicted RBP23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 SP6Q3SY56 376 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 AKIRIN2Q53H80 203 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 TP53RKQ96S44 253 aa23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 FAM212BQ9NTI7 297 aaPredicted RBP23.02■■□□□ 1.28
CHCHD4-202ENST00000396914 RPLP1P05386 114 aaKnown RBP23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 CD40LGP29965 261 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 PPIFP30405 207 aaKnown RBP23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 RPL8P62917 257 aaKnown RBP23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 POU2AF1Q16633 256 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 TRIM16LQ309B1 348 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 C10orf55Q5SWW7 151 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 ZNF355PQ9NSJ1 428 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 VSIG4Q9Y279 399 aa23.01■■□□□ 1.27
CHCHD4-202ENST00000396914 CENPXA8MT69 81 aa23■■□□□ 1.27
CHCHD4-202ENST00000396914 NUDT19A8MXV4 375 aa23■■□□□ 1.27
CHCHD4-202ENST00000396914 MINDY2Q8NBR6 621 aa23■■□□□ 1.27
CHCHD4-202ENST00000396914 TSPAN15O95858 294 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 MAS1LP35410 378 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 OR5T1Q8NG75 326 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 FAM110DQ8TAY7 271 aaPredicted RBP22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 CASTOR1Q8WTX7 329 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 FYTTD1Q96QD9 318 aaKnown RBP22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 SPIN2AQ99865 258 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 SPIN2BQ9BPZ2 258 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 NAA60Q9H7X0 242 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 TRAV3A0A0B4J244 114 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 NAP1L6A6NFF2 107 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 UPK2O00526 184 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 AKR1C4P17516 323 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 HLA-GP17693 338 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 RPL27AP46776 148 aaKnown RBP22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 RPL23AP62750 156 aaKnown RBP22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 TMED4Q7Z7H5 227 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 SGPP2Q8IWX5 399 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 ADAD2Q8NCV1 583 aaKnown RBP22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 ZFP57Q9NU63 452 aa22.99■■□□□ 1.27
CHCHD4-202ENST00000396914 ADARB2-AS1A8MUL3 147 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 SNAPC5O75971 98 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 PSMB8P28062 276 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 C19orf54Q5BKX5 351 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 OR5M8Q8NGP6 311 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 MS4A10Q96PG2 267 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 COMMD5Q9GZQ3 224 aa22.98■■□□□ 1.27
CHCHD4-202ENST00000396914 SOX15O60248 233 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 IGLV1-40P01703 118 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 OR5AC1P0C628 307 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 MYOD1P15172 320 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 CCR6P51684 374 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 H2BFWTQ7Z2G1 175 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 KLHL30-AS1Q8NEE0 82 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 OR4F17Q8NGA8 305 aa22.97■■□□□ 1.27
CHCHD4-202ENST00000396914 TMEM68Q96MH6 324 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms