RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 GPR137BO60478 399 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 NXPH3O95157 252 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 FGF2P09038 288 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 C4BPBP20851 252 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 DYNLT3P51808 116 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 OR2B8PP59922 312 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 MRPL41Q8IXM3 137 aaKnown RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 DCUN1D4Q92564 292 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 WDR89Q96FK6 387 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
VAMP1-202ENST00000396308 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
VAMP1-202ENST00000396308 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 E5RGE8 158 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 K7EPK0 472 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 SSSCA1O60232 199 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 PITX3O75364 302 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 DEDDO75618 318 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 AVPP01185 164 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 SLC25A4P12235 298 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 TNFRSF9Q07011 255 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 HNF4GQ14541 408 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 PSG5Q15238 335 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 TMEM167AQ8TBQ9 72 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 MEGF9Q9H1U4 602 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 ZC4H2Q9NQZ6 224 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 YAE1D1Q9NRH1 226 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
VAMP1-202ENST00000396308 NSG2Q9Y328 171 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 PDZD2O15018 2839 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 MED13LQ71F56 2210 aa12.38□□□□□ -0.43
VAMP1-202ENST00000396308 RRHO14718 337 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 SYNGR2O43760 224 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 MAS1LP35410 378 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 HOXA1P49639 335 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-202ENST00000396308 SPCS3P61009 180 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 RPL23AP62750 156 aaKnown RBP12.37□□□□□ -0.43
VAMP1-202ENST00000396308 RELBQ01201 579 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 IL15RAQ13261 267 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 EBI3Q14213 229 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 AANATQ16613 207 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 Q6ZRM9 215 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 ZNF546Q86UE3 836 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 HSPB7Q9UBY9 170 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 ZNF257Q9Y2Q1 563 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 OR51B2Q9Y5P1 312 aa12.37□□□□□ -0.43
VAMP1-202ENST00000396308 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 ARPC5O15511 151 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 FSHBP01225 129 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 IGLV2-23P01705 113 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 F2RL1P55085 397 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 POLR2GP62487 172 aaKnown RBP eCLIP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 ID3Q02535 119 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 SSX3Q99909 188 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
VAMP1-202ENST00000396308 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 HIPK2Q9H2X6 1198 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 TMEM14BQ9NUH8 114 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 C2CD3Q4AC94 2353 aa12.36□□□□□ -0.43
VAMP1-202ENST00000396308 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
VAMP1-202ENST00000396308 CD24P25063 80 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 PAX6P26367 422 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 RIPPLY3P57055 190 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
VAMP1-202ENST00000396308 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 PPP1R27Q86WC6 154 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 NPBQ8NG41 125 aa12.35□□□□□ -0.43
VAMP1-202ENST00000396308 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms