RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 PRAMEF6Q5VXH4 476 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 RNASE7Q9H1E1 156 aaKnown RBP11.94□□□□□ -0.5
CLIP2-203ENST00000395060 OPN3Q9H1Y3 402 aaPredicted RBP11.94□□□□□ -0.5
CLIP2-203ENST00000395060 MS4A5Q9H3V2 200 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 NAT8BQ9UHF3 227 aa11.94□□□□□ -0.5
CLIP2-203ENST00000395060 CA1P00915 261 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-203ENST00000395060 MYOD1P15172 320 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 AMTP48728 403 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 HTD2P86397 168 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 TMEM183BQ1AE95 376 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 PPP1R32Q7Z5V6 425 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 TMEM105Q8N8V8 129 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 CIB3Q96Q77 187 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-203ENST00000395060 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 MIEN1Q9BRT3 115 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
CLIP2-203ENST00000395060 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 PDE6DO43924 150 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 CATR1Q13166 79 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 TXN2Q99757 166 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 ABCA1O95477 2261 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 DNPH1O43598 174 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 GATA2P23769 480 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-203ENST00000395060 C1orf210Q8IVY1 113 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 RTL8AQ9BWD3 113 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 ZNF703Q9H7S9 590 aaPredicted RBP11.93□□□□□ -0.5
CLIP2-203ENST00000395060 DNAJC4Q9NNZ3 241 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 LOXL2Q9Y4K0 774 aa11.93□□□□□ -0.5
CLIP2-203ENST00000395060 DIRC3C9JPN6 131 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 OR4P4Q8NGL7 312 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 STRADBQ9C0K7 418 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 DEFB127Q9H1M4 99 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 TP73-AS1Q9UF72 201 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 MPC1Q9Y5U8 109 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 LYZL6O75951 148 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 MGST1P10620 155 aaKnown RBP11.92□□□□□ -0.5
CLIP2-203ENST00000395060 GNB4Q9HAV0 340 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 TBL2Q9Y4P3 447 aaKnown RBP11.92□□□□□ -0.5
CLIP2-203ENST00000395060 CACNA1GO43497 2377 aa11.92□□□□□ -0.5
CLIP2-203ENST00000395060 TNFSF13O75888 250 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 CGAP01215 116 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 RAB7AP51149 207 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 ATP6V1FQ16864 119 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 OR13A1Q8NGR1 328 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 OR10J4P0C629 311 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 CHRNB4P30926 498 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 HINT1P49773 126 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-203ENST00000395060 ACSF3Q4G176 576 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-203ENST00000395060 SPATA45Q537H7 98 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 TREML4Q6UXN2 200 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 Q8N7P7 452 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 MGST2Q99735 147 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 GVINP1Q7Z2Y8 2422 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 NTN3O00634 580 aaPredicted RBP11.91□□□□□ -0.5
CLIP2-203ENST00000395060 CER1O95813 267 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 SFTPCP11686 197 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 Q6ZN92 141 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 MOB3BQ86TA1 216 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 OR4A16Q8NH70 328 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 FAM216AQ8WUB2 273 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 KCNIP2Q9NS61 270 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 GNG12Q9UBI6 72 aa11.91□□□□□ -0.5
CLIP2-203ENST00000395060 TRBV6-6A0A0A6YYG2 114 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 FAM90A26D6RGX4 464 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 AGFG2O95081 481 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 DUSP3P51452 185 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-203ENST00000395060 CLDN18P56856 261 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 FOXL1Q12952 345 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 UTF1Q5T230 341 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 TIPARPQ7Z3E1 657 aaKnown RBP11.9□□□□□ -0.5
CLIP2-203ENST00000395060 STPG4Q8N801 248 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 ARRDC1-AS1Q9H2J1 176 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 TMEM30CPA0ZSE6 113 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 AHRRA9YTQ3 701 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 CRYBB3P26998 211 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 ARR3P36575 388 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 FABP6P51161 128 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 OR2M7Q8NG81 312 aa11.9□□□□□ -0.5
CLIP2-203ENST00000395060 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-203ENST00000395060 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
CLIP2-203ENST00000395060 HCFC1P51610 2035 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 M0R1X1 148 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 ZNF253O75346 499 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 MPV17P39210 176 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 STARD4Q96DR4 205 aa11.89□□□□□ -0.51
CLIP2-203ENST00000395060 WDR83OSQ9Y284 106 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms