RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 A0A087WWC5 75 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 J3QT63 122 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF83P51522 516 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 HLA-DRB5Q30154 266 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 MARCH11A6NNE9 402 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 M0R296 226 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 MYOD1P15172 320 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 ADMP35318 185 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 Q6ZVH6 145 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 NPCDR1Q9BY65 106 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 PRO3102Q9H379 93 aa11.12□□□□□ -0.63
NFKB1-202ENST00000394820 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SNAI2O43623 268 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 CD46P15529 392 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 RPP30P78346 268 aaKnown RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 RBMXL3Q8N7X1 1067 aaKnown RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 ZNRF1Q8ND25 227 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 OR2D3Q8NGH3 330 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF703Q9H7S9 590 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 TDRG1Q3Y452 100 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 WDYHV1Q96HA8 205 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 RNASE7Q9H1E1 156 aaKnown RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 A0A1W2PNU3 283 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-202ENST00000394820 CA11O75493 328 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SP9P0CG40 484 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 ACP1P24666 158 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 MMDQ15546 238 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SLC24A4Q8NFF2 622 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SH2D2AQ9NP31 389 aa11.11□□□□□ -0.63
NFKB1-202ENST00000394820 SPAARA0A1B0GVQ0 90 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 OR5B21A6NL26 309 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 KLRC4-KLRK1H3BQV0 150 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 CGAP01215 116 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 GCGP01275 180 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 SRIP30626 198 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-202ENST00000394820 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-202ENST00000394820 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 PIGBOS1A0A0B4J2F0 54 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 NKX2-8O15522 239 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 ORM2P19652 201 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 CCKARP32238 428 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 LHX2P50458 406 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 GNB1P62873 340 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 Q6ZPA2 131 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 C20orf202A1L168 122 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 HELTA6NFD8 242 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 LRRC30A6NM36 301 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 M0R1B8 84 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 PSPNO60542 156 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 MFAP2P55001 183 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 GFRA1P56159 465 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 ARSJQ5FYB0 599 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-202ENST00000394820 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 SFRP2Q96HF1 295 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 AP1S3Q96PC3 154 aa11.1□□□□□ -0.63
NFKB1-202ENST00000394820 NUPR1O60356 82 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 MPC1Q9Y5U8 109 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 A8MWP6 167 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 SP1P08047 785 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 CLDN18P56856 261 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 SPCS3P61009 180 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 SPATA45Q537H7 98 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 HAPLN4Q86UW8 402 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 DEFB124Q8NES8 71 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
NFKB1-202ENST00000394820 TANC2Q9HCD6 1990 aa11.09□□□□□ -0.63
NFKB1-202ENST00000394820 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.63
NFKB1-202ENST00000394820 RANP62826 216 aaKnown RBP11.08□□□□□ -0.63
NFKB1-202ENST00000394820 RPEL1Q2QD12 228 aa11.08□□□□□ -0.63
NFKB1-202ENST00000394820 ZNF324BQ6AW86 544 aaPredicted RBP11.08□□□□□ -0.63
NFKB1-202ENST00000394820 ZGRF1Q86YA3 2104 aa11.08□□□□□ -0.63
NFKB1-202ENST00000394820 DAZAP1Q96EP5 407 aaKnown RBP11.08□□□□□ -0.63
NFKB1-202ENST00000394820 TECTBQ96PL2 329 aa11.08□□□□□ -0.63
NFKB1-202ENST00000394820 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 TDGF1P13385 188 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 KDF1Q8NAX2 398 aaPredicted RBP11.08□□□□□ -0.64
NFKB1-202ENST00000394820 OR4C5Q8NGB2 326 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 OR13A1Q8NGR1 328 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 PPP1R35Q8TAP8 253 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 CLDN14O95500 239 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 NPSP0C0P6 89 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 SOX8P57073 446 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
NFKB1-202ENST00000394820 IGHV3-72A0A0B4J1Y9 119 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms