RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
CCT4-201ENST00000394440 BET1LQ9NYM9 111 aa12.14□□□□□ -0.47
CCT4-201ENST00000394440 TCF19Q9Y242 345 aa12.14□□□□□ -0.47
CCT4-201ENST00000394440 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 IL3RAP26951 378 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 RUNX1Q01196 453 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 PUSL1Q8N0Z8 303 aaKnown RBP12.13□□□□□ -0.47
CCT4-201ENST00000394440 MMP26Q9NRE1 261 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 NUDT19A8MXV4 375 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 TGIF2LXQ8IUE1 241 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
CCT4-201ENST00000394440 UPK2O00526 184 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
CCT4-201ENST00000394440 ZP3P21754 424 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 IL34Q6ZMJ4 242 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
CCT4-201ENST00000394440 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 AIFM2Q9BRQ8 373 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 NUP50Q9UKX7 468 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 hCG_1809904A0A1W2PP81 198 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 A0A1W2PR64 198 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 A0A1W2PRV1 198 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 IFNA5P01569 189 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 OR8U8P0C7N1 319 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 PRRX1P54821 245 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 F2RL1P55085 397 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 HSPE1P61604 102 aaKnown RBP12.12□□□□□ -0.47
CCT4-201ENST00000394440 LRRC75BQ2VPJ9 315 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 OR4P4Q8NGL7 312 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 HARBI1Q96MB7 349 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
CCT4-201ENST00000394440 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 UMAD1C9J7I0 102 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 H7C2Y5 167 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 TRIM77I1YAP6 450 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 M0R1W7 72 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 SHOXO15266 292 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 FHITP49789 147 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 UQCC3Q6UW78 93 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 LHX4Q969G2 390 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
CCT4-201ENST00000394440 HRH4Q9H3N8 390 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 ONECUT1Q9UBC0 465 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 BUB1B-PAK6H3BSN5 160 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
CCT4-201ENST00000394440 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 VWC2Q2TAL6 325 aa12.11□□□□□ -0.47
CCT4-201ENST00000394440 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
CCT4-201ENST00000394440 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 SCAF4O95104 1147 aaKnown RBP12.1□□□□□ -0.47
CCT4-201ENST00000394440 MC5RP33032 325 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 RAB13P51153 203 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 PINX1Q96BK5 328 aaKnown RBP12.1□□□□□ -0.47
CCT4-201ENST00000394440 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
CCT4-201ENST00000394440 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 KBTBD11O94819 623 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 IGHV4-39P01824 125 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
CCT4-201ENST00000394440 PRSS46E5RG02 174 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 MYOD1P15172 320 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 COX7A1P24310 79 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 CAMLGP49069 296 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 ARF6P62330 175 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCT4-201ENST00000394440 THNSL2Q86YJ6 484 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 OR11H6Q8NGC7 330 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
CCT4-201ENST00000394440 PRELID1Q9Y255 219 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 OR51B2Q9Y5P1 312 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 FOSL1P15407 271 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
CCT4-201ENST00000394440 ZFP36P26651 326 aaKnown RBP12.09□□□□□ -0.47
CCT4-201ENST00000394440 HOXA1P49639 335 aaPredicted RBP12.09□□□□□ -0.47
CCT4-201ENST00000394440 PRCDQ00LT1 54 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 PAX2Q02962 417 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 PNKDQ8N490 385 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 CLCC1Q96S66 551 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 BPESC1Q9GZL8 116 aa12.09□□□□□ -0.47
CCT4-201ENST00000394440 MS4A7Q9GZW8 240 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms