RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NPCDR1Q9BY65 106 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 SHANK3Q9BYB0 1731 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 A0A1B0GV90 55 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 RPS20P60866 119 aaKnown RBP11.16□□□□□ -0.62
LCA5-202ENST00000392959 GUCD1Q96NT3 240 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 ABCA7Q8IZY2 2146 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 POLEQ07864 2286 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 IGHV3-48P01763 117 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 METTL26Q96S19 204 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
LCA5-202ENST00000392959 CHCHD2Q9Y6H1 151 aaPredicted RBP11.16□□□□□ -0.62
LCA5-202ENST00000392959 RIF1Q5UIP0 2472 aaKnown RBP11.16□□□□□ -0.62
LCA5-202ENST00000392959 LNP1A1A4G5 178 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 IGFBP3P17936 291 aaPredicted RBP11.16□□□□□ -0.62
LCA5-202ENST00000392959 GFRA1P56159 465 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 NEUROG3Q9Y4Z2 214 aa11.16□□□□□ -0.62
LCA5-202ENST00000392959 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 ZNF324O75467 553 aaPredicted RBP11.15□□□□□ -0.62
LCA5-202ENST00000392959 CTSSP25774 331 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 SYNGR3O43761 229 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 UNQ5815/PRO19632Q6UWF5 114 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 SCN10AQ9Y5Y9 1956 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 IFNL4K9M1U5 179 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 REG1AP05451 166 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 BIVMQ86UB2 503 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
LCA5-202ENST00000392959 NCOR1O75376 2440 aa11.15□□□□□ -0.63
LCA5-202ENST00000392959 WNK2Q9Y3S1 2297 aa11.15□□□□□ -0.63
LCA5-202ENST00000392959 A0A1W2PS18 150 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 DPRXA6NFQ7 191 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 CGB1A6NKQ9 187 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 GDF9O60383 454 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 RFPL3SP0C7P2 107 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 STARD6P59095 220 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 PPP1R32Q7Z5V6 425 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ZNRF1Q8ND25 227 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 WNT9BO14905 357 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 COX6CP09669 75 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ANOS1P23352 680 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 TM4SF20Q53R12 229 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ZCCHC14Q8WYQ9 949 aaKnown RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 MED12Q93074 2177 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 PROB1E7EW31 1015 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 PF4V1P10720 104 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 LY6G6FQ5SQ64 297 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 FGF11Q92914 225 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 MIEN1Q9BRT3 115 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 GPX4P36969 197 aaPredicted RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 FOXA3P55318 350 aaPredicted RBP11.14□□□□□ -0.63
LCA5-202ENST00000392959 PCSK4Q6UW60 755 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ERASQ7Z444 233 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 TIMP4Q99727 224 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 ATAD5Q96QE3 1844 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 RGPD4Q7Z3J3 1758 aa11.14□□□□□ -0.63
LCA5-202ENST00000392959 A0A087WWC5 75 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
LCA5-202ENST00000392959 HIST1H4GQ99525 98 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 TUBA4BQ9H853 241 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 COL11A2P13942 1736 aaPredicted RBP11.13□□□□□ -0.63
LCA5-202ENST00000392959 NUDT3O95989 172 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 HBBP68871 147 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 CTAG1AP78358 180 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 Q6ZT83 130 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 RTN4RQ9BZR6 473 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 FBLN5Q9UBX5 448 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
LCA5-202ENST00000392959 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 EPOPA6NHQ4 379 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
LCA5-202ENST00000392959 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 TFPI2P48307 235 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 PSG9Q00887 426 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 ACACAQ13085 2346 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 CX3CL1P78423 397 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 SDF2L1Q9HCN8 221 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
LCA5-202ENST00000392959 SPTAN1Q13813 2472 aaKnown RBP11.12□□□□□ -0.63
LCA5-202ENST00000392959 LIPFP07098 398 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 HOXA5P20719 270 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 DNLZQ5SXM8 178 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 STPG1Q5TH74 334 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms