RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 WDR73Q6P4I2 378 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 DUSP23Q9BVJ7 150 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 METTL7AQ9H8H3 244 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 ZNF391Q9UJN7 358 aa12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-201ENST00000389386 ASPMQ8IZT6 3477 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 SIRPB1O00241 398 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 TMEM108Q6UXF1 575 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 ULBP2Q9BZM5 246 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 OR1A1Q9P1Q5 309 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 V9GYV3 84 aa12.27□□□□□ -0.44
VPS9D1-201ENST00000389386 ODAMA1E959 279 aa12.27□□□□□ -0.45
VPS9D1-201ENST00000389386 SRIP30626 198 aa12.27□□□□□ -0.45
VPS9D1-201ENST00000389386 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.45
VPS9D1-201ENST00000389386 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
VPS9D1-201ENST00000389386 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-201ENST00000389386 ZNF318Q5VUA4 2279 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 OR2T8A6NH00 312 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 BMPR1BO00238 502 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 NTF3P20783 257 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 CX3CL1P78423 397 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 RELBQ01201 579 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 MPV17L2Q567V2 206 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 ZNF439Q8NDP4 499 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 HES4Q9HCC6 221 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 CNOT1A5YKK6 2376 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 PRRC2CQ9Y520 2896 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 IGHV3-15A0A0B4J1V0 119 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 A0A1W2PPV4 95 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 AHRRA9YTQ3 701 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 NPIPA2E9PIF3 369 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 SPINK4O60575 86 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 PATE4P0C8F1 98 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 CLDN18P56856 261 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 SLC23A3Q6PIS1 610 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 FAM58AQ8N1B3 248 aa12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-201ENST00000389386 TRBV6-6A0A0A6YYG2 114 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 ARL14EPLP0DKL9 152 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 IL1F10Q8WWZ1 152 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 FAM186AA6NE01 2351 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 TOX4O94842 621 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 APOBEC3AP31941 199 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 PEAR1Q5VY43 1037 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 DEFB126Q9BYW3 111 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 LY96Q9Y6Y9 160 aa12.25□□□□□ -0.45
VPS9D1-201ENST00000389386 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 NPIPA3F8WFD2 350 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 CER1O95813 267 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 SELENOVP59797 346 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 RPL31P62899 125 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 TBR1Q16650 682 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 DEFB125Q8N687 156 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 ABHD3Q8WU67 409 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 MEGF9Q9H1U4 602 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 YTHDF2Q9Y5A9 579 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 RRHO14718 337 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 ZFAND5O76080 213 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 ZNF32P17041 273 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 EDDM3BP56851 147 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 TMEM95Q3KNT9 176 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 ZNF718Q3SXZ3 478 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 COX19Q49B96 90 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 EAF1Q96JC9 268 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 MUC6Q6W4X9 2439 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 LRRC30A6NM36 301 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 C9JCJ5 164 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 NPIPB11E5RHQ5 1161 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 ZG16O60844 167 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 NHLH1Q02575 133 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 IGFBP7Q16270 282 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 Q56UQ5 140 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 EBLN2Q6P2I7 272 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 WDR83OSQ9Y284 106 aa12.24□□□□□ -0.45
VPS9D1-201ENST00000389386 CORTO00230 105 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 P0C879 139 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 BVES-AS1Q5T3Y7 98 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 FAM71F2Q6NXP2 309 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 SCCPDHQ8NBX0 429 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 OR8B2Q96RD0 313 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 FKBP2P26885 142 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 DUSP3P51452 185 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 OR52L2PQ8NGH6 319 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 ZDHHC16Q969W1 377 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 WASHC3Q9Y3C0 194 aa12.23□□□□□ -0.45
VPS9D1-201ENST00000389386 GTF3C1Q12789 2109 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms