RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GFRA3O60609 400 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 MPDU1O75352 247 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 PRSS8Q16651 343 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 TPTE2P1Q5T6R2 138 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 TOMM20LQ6UXN7 152 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF645Q8N7E2 425 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 FAM57AQ8TBR7 257 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 DTD1Q8TEA8 209 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 ZFHX4Q86UP3 3567 aa7.45□□□□□ -1.22
GPNMB-202ENST00000381990 PRR14LQ5THK1 2151 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 CECR9P0C854 216 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 KITLGP21583 273 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 BRS3P32247 399 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 GNB1P62873 340 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 PSG7Q13046 419 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 CATR1Q13166 79 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 CST9LP1Q5W188 147 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 Q6P435 159 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 KLF14Q8TD94 323 aaPredicted RBP7.44□□□□□ -1.22
GPNMB-202ENST00000381990 MSRB2Q9Y3D2 182 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 WIPI2Q9Y4P8 454 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 ASPMQ8IZT6 3477 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 K7ENP7 123 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 ADMP35318 185 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 TBR1Q16650 682 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 RPRMLQ8N4K4 120 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 TMEM204Q9BSN7 226 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 VAMP8Q9BV40 100 aa7.44□□□□□ -1.22
GPNMB-202ENST00000381990 RP1L1Q8IWN7 2480 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-202ENST00000381990 TRBV9A0A0B4J1U6 114 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 ODAMA1E959 279 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 NDUFB4O95168 129 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 CLDN14O95500 239 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 CEACAM8P31997 349 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-202ENST00000381990 MPV17P39210 176 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 RPL19P84098 196 aaKnown RBP7.43□□□□□ -1.22
GPNMB-202ENST00000381990 TLE1Q04724 770 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 TFF3Q07654 80 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 ALKBH6Q3KRA9 238 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 C1orf174Q8IYL3 243 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 OR5T1Q8NG75 326 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 OR5AU1Q8NGC0 362 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 OR1L1Q8NH94 360 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF488Q96MN9 340 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 SFXN3Q9BWM7 321 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 LPAR2Q9HBW0 351 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 POLDIP2Q9Y2S7 368 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 IGHV2OR16-5A0A0B4J2B6 119 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 IGHV1-18A0A0C4DH31 117 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 A0A1W2PPV4 95 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 RAB29O14966 203 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 IRF2P14316 349 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 CRISP2P16562 243 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 Q0VG73 95 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF474Q6S9Z5 364 aaPredicted RBP7.43□□□□□ -1.22
GPNMB-202ENST00000381990 Q6ZWC4 215 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 WDR86Q86TI4 376 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 PRR18Q8N4B5 295 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 OR4B1Q8NGF8 309 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 WFIKKN1Q96NZ8 548 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 CLN8Q9UBY8 286 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 LY96Q9Y6Y9 160 aa7.43□□□□□ -1.22
GPNMB-202ENST00000381990 HEATR1Q9H583 2144 aaKnown RBP7.43□□□□□ -1.22
GPNMB-202ENST00000381990 NUPR1O60356 82 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 RHBDL1O75783 438 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 TIMM23BQ5SRD1 257 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 SCCPDHQ8NBX0 429 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 OR10G8Q8NGN5 311 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 KCNIP1Q9NZI2 227 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 MMP23AO75900 390 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 IL6RP08887 468 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 NPSP0C0P6 89 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 G6PCP35575 357 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 RPP30P78346 268 aaKnown RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 ZNF718Q3SXZ3 478 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 Q8NA96 180 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 QTRT1Q9BXR0 403 aaKnown RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 PATZ1Q9HBE1 687 aaKnown RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 IL36BQ9NZH7 164 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 ZFP30Q9Y2G7 519 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 PTPRQQ9UMZ3 2332 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 PRRG2O14669 202 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 RBFOX2O43251 390 aaKnown RBP eCLIP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 ZG16O60844 167 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 RAMP3O60896 148 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 OR2H2O95918 312 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 CXorf1O96002 111 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 CD1BP29016 333 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 ATP5G3P48201 142 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 ERVK11-1P61568 191 aa7.42□□□□□ -1.22
GPNMB-202ENST00000381990 MRPS11P82912 194 aaKnown RBP7.42□□□□□ -1.22
GPNMB-202ENST00000381990 EIF4EBP1Q13541 118 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms