RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NINJ1Q92982 152 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 TMEM45BQ96B21 275 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 KMT2EQ8IZD2 1858 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 IGKV3D-15A0A087WSY6 115 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 PDE6DO43924 150 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 CELA3AP09093 270 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 SP9P0CG40 484 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 LHX2P50458 406 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 VKORC1L1Q8N0U8 176 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 RCHY1Q96PM5 261 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
SDC1-202ENST00000381150 RNASE7Q9H1E1 156 aaKnown RBP11.6□□□□□ -0.55
SDC1-202ENST00000381150 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.6□□□□□ -0.55
SDC1-202ENST00000381150 IL36GQ9NZH8 169 aa11.6□□□□□ -0.55
SDC1-202ENST00000381150 CDX4O14627 284 aaPredicted RBP11.59□□□□□ -0.55
SDC1-202ENST00000381150 CLDN14O95500 239 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
SDC1-202ENST00000381150 ATP6V1FQ16864 119 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 PLA2G2CQ5R387 149 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 MMD2Q8IY49 270 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 OR2M7Q8NG81 312 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 OR52L2PQ8NGH6 319 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 HES7Q9BYE0 225 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 ARFGEF3Q5TH69 2177 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 NXPH2O95156 264 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 RELBQ01201 579 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
SDC1-202ENST00000381150 DPRXA6NFQ7 191 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 HYPMO75409 117 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 TIMP3P35625 211 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 CLDN18P56856 261 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 LINC00310P59036 64 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
SDC1-202ENST00000381150 RPL30P62888 115 aaKnown RBP11.59□□□□□ -0.55
SDC1-202ENST00000381150 ZNF439Q8NDP4 499 aa11.59□□□□□ -0.55
SDC1-202ENST00000381150 C17orf98A8MV24 154 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 NDUFB8O95169 186 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 CD1BP29016 333 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 TMEM14EPQ6UXP3 125 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 ZNF596Q8TC21 504 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 SPSB4Q96A44 273 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 RNF2Q99496 336 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 ZNF391Q9UJN7 358 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 MED13Q9UHV7 2174 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 LRP5LA4QPB2 252 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 GABRA2P47869 451 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 CEACAM21Q3KPI0 293 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 COLCA1Q6ZS62 124 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 FAM173AQ9BQD7 235 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 C1QTNF5Q9BXJ0 243 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 BET1LQ9NYM9 111 aa11.58□□□□□ -0.56
SDC1-202ENST00000381150 BOKQ9UMX3 212 aaPredicted RBP11.58□□□□□ -0.56
SDC1-202ENST00000381150 FOXL1Q12952 345 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 RPEL1Q2QD12 228 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 NRN1LQ496H8 165 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 LYG1Q8N1E2 194 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 KCNIP1Q9NZI2 227 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 CDIPTO14735 213 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 SSBP3Q9BWW4 388 aaPredicted RBP11.57□□□□□ -0.56
SDC1-202ENST00000381150 CADP27708 2225 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 GPX1P07203 203 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 SAPCD1Q5SSQ6 148 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 HES3Q5TGS1 186 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 SPATA31B1PQ5VZV4 182 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 TMEM144Q7Z5S9 345 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 MRGPRDQ8TDS7 321 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
SDC1-202ENST00000381150 BDP1A6H8Y1 2624 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 MLNRO43193 412 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 HSBP1O75506 76 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 ABHD12Q8N2K0 398 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 C12orf49Q9H741 205 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 ATMQ13315 3056 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 RBX1P62877 108 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 PLP2Q04941 152 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 AESQ08117 197 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 LDLRAD2Q5SZI1 272 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 PRR27Q6MZM9 219 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
SDC1-202ENST00000381150 PQLC2Q6ZP29 291 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 CENPVQ7Z7K6 275 aaPredicted RBP11.56□□□□□ -0.56
SDC1-202ENST00000381150 PRDM14Q9GZV8 571 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 ARL2-SNX15V9GYD0 113 aa11.56□□□□□ -0.56
SDC1-202ENST00000381150 C21orf140B9A014 251 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 M0R296 226 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 FOXH1O75593 365 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 OR2H2O95918 312 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 CAMPP49913 170 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 EDDM3AQ14507 147 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 STUMQ69YW2 141 aa11.55□□□□□ -0.56
SDC1-202ENST00000381150 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms