RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TM4SF5O14894 197 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 SPRY3O43610 288 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 SELLP14151 372 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 DEFB108BQ8NET1 73 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 HES4Q9HCC6 221 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 CEP295Q9C0D2 2601 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 MKRN2OSH3BPM6 223 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 AQP7O14520 342 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 PROP1O75360 226 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 CD33P20138 364 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 ANAPC16Q96DE5 110 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 DKK4Q9UBT3 224 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 ZNF320A2RRD8 509 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 PDLIM4P50479 330 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 VWC2Q2TAL6 325 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 SPRNQ5BIV9 151 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 Q8TCH9 128 aa13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 MRPL37Q9BZE1 423 aaKnown RBP13.49□□□□□ -0.25
NKX3-1-201ENST00000380871 PTPRBP23467 1997 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 EREGO14944 169 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 RAB29O14966 203 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 CD1BP29016 333 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 UTF1Q5T230 341 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 TET2Q6N021 2002 aaPredicted RBP13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 ZNF891A8MT65 544 aaPredicted RBP13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 RRHO14718 337 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 FCGR3BO75015 233 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 ACP7Q6ZNF0 438 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 R3HDM4Q96D70 268 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 ACY3Q96HD9 319 aa13.48□□□□□ -0.25
NKX3-1-201ENST00000380871 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 TNFSF13O75888 250 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 ARL14EPLP0DKL9 152 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 MSMPQ1L6U9 139 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 WDR82Q6UXN9 313 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 ZBTB34Q8NCN2 500 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 CXXC4Q9H2H0 198 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 THBS3P49746 956 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 CNN1P51911 297 aaKnown RBP13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 TAS2R60P59551 318 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 TGIF2LXQ8IUE1 241 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 ZNF71Q9NQZ8 489 aaPredicted RBP13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 TPRP12270 2363 aaKnown RBP13.47□□□□□ -0.25
NKX3-1-201ENST00000380871 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 GRIFINA4D1Z8 144 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 IGKV3-15P01624 115 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 SRP14P37108 136 aaKnown RBP13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 RPL15P61313 204 aaKnown RBP13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 MIC13Q5XKP0 118 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 CIB3Q96Q77 187 aaPredicted RBP13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 TRAPPC1Q9Y5R8 145 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 C17orf112F2Z3M2 114 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 PAX5Q02548 391 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 ABHD12Q8N2K0 398 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 CISD2Q8N5K1 135 aaKnown RBP13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 SGMS2Q8NHU3 365 aa13.46□□□□□ -0.25
NKX3-1-201ENST00000380871 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 VENTXO95231 258 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 TYMSP04818 313 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 FAM27E3Q08E93 113 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 KCNIP4Q6PIL6 250 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 GBGT1Q8N5D6 347 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 CD177Q8N6Q3 437 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 TCF15Q12870 199 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 MOGAT3Q86VF5 341 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 ZNRF1Q8ND25 227 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 LEAP2Q969E1 77 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 MS4A5Q9H3V2 200 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 DMXL2Q8TDJ6 3036 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 IMMP2LQ96T52 175 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 MGST2Q99735 147 aa13.45□□□□□ -0.26
NKX3-1-201ENST00000380871 SCGB1D1O95968 90 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 GCGP01275 180 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 PLSCR4Q9NRQ2 329 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 CBLN4Q9NTU7 201 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 GNG12Q9UBI6 72 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 TMEM210A6NLX4 147 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 AHRRA9YTQ3 701 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 SPATA31B1PQ5VZV4 182 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 SFRP2Q96HF1 295 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 C15orf65H3BRN8 121 aa13.44□□□□□ -0.26
NKX3-1-201ENST00000380871 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms