RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PMS2CLQ68D20 193 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 Q6ZNB5 142 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 ZIC3O60481 467 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 LIMS1P48059 325 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 ZNF56Q15929 161 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 TMEM252Q8N6L7 170 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 FGF11Q92914 225 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 SPSB4Q96A44 273 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 C20orf144Q9BQM9 153 aa9.28□□□□□ -0.92
CLCN4-202ENST00000380833 MUC21A0A0G2JKD1 596 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 ID1P41134 155 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 MUC21Q5SSG8 566 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 REG4Q9BYZ8 158 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 KLK15Q9H2R5 256 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 HEXA-AS1Q9H8Q6 139 aa9.27□□□□□ -0.92
CLCN4-202ENST00000380833 PRB4P10163 310 aaPredicted RBP9.27□□□□□ -0.93
CLCN4-202ENST00000380833 EVI2AP22794 236 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 CACNG7P62955 275 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 SRSF3P84103 164 aaKnown RBP9.27□□□□□ -0.93
CLCN4-202ENST00000380833 TEPPQ6URK8 271 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 PRR19A6NJB7 356 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 FBXW9Q5XUX1 488 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 LINC01555Q8NAE3 123 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 RASL10BQ96S79 203 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 OR9G9P0C7N8 305 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 PGPEP1Q9NXJ5 209 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 KLK13Q9UKR3 277 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 PHIPQ8WWQ0 1821 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 PROB1E7EW31 1015 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 SFTA2Q6UW10 78 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 TMEM91Q6ZNR0 172 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 DTX4Q9Y2E6 619 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 MYOM1P52179 1685 aa9.27□□□□□ -0.93
CLCN4-202ENST00000380833 Q8IYB0 196 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 F8W1H4 67 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 APOHP02749 345 aaPredicted RBP9.26□□□□□ -0.93
CLCN4-202ENST00000380833 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 TMEM242Q9NWH2 141 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 GPBAR1Q8TDU6 330 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 DDB2Q92466 427 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 CEACAM8P31997 349 aaPredicted RBP9.26□□□□□ -0.93
CLCN4-202ENST00000380833 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 BTAF1O14981 1849 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 PEX11BO96011 259 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 MRPL55Q7Z7F7 128 aaKnown RBP9.26□□□□□ -0.93
CLCN4-202ENST00000380833 HOGA1Q86XE5 327 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 TTTY12Q9BZ98 90 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 KCNK17Q96T54 332 aa9.26□□□□□ -0.93
CLCN4-202ENST00000380833 ASXL3Q9C0F0 2248 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 MPDU1O75352 247 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 RPS11P62280 158 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 MDC1Q14676 2089 aaKnown RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 KLK8O60259 260 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 CLDN14O95500 239 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 SRD5A2P31213 254 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 NSUN5P1Q3KNT7 163 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 NABP2Q9BQ15 211 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 PAPPA2Q9BXP8 1791 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 TAF1P21675 1872 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 SS18L1O75177 396 aaPredicted RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 PRR35P0CG20 571 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 CTLA4P16410 223 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 RPL31P62899 125 aaKnown RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 ZNF658BQ4V348 819 aaPredicted RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 IL36RNQ9UBH0 155 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 TRBV24-1A0A075B6N3 115 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 FAM231BA6NCW3 169 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 H3BRM9 83 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 K7EP34 96 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 UCNP55089 124 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 UCP2P55851 309 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 RNASEH2CQ8TDP1 164 aaKnown RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 GGTLC1Q9BX51 225 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 CXCL1P09341 107 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 VKORC1L1Q8N0U8 176 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 ANKRD29Q8N6D5 301 aa9.25□□□□□ -0.93
CLCN4-202ENST00000380833 ITLN2Q8WWU7 325 aaPredicted RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 TAF15Q92804 592 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 FOXD3Q9UJU5 478 aaPredicted RBP9.25□□□□□ -0.93
CLCN4-202ENST00000380833 ZNF826PQ6ZT77 177 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 NPFFR1Q9GZQ6 430 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 RNF122Q9H9V4 155 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 POLR3KQ9Y2Y1 108 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 DUX4L9Q6RFH8 374 aaPredicted RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 PPDPFLQ8WWR9 84 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
CLCN4-202ENST00000380833 PILRBQ9UKJ0 227 aa9.24□□□□□ -0.93
CLCN4-202ENST00000380833 A0A0U1RQV5 110 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms