RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ZNF708P17019 499 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 GLIPR1P48060 266 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 K7N7A8 449 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 TMEM187Q14656 261 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 SLC22A18ASQ8N1D0 253 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 IGHMP01871 453 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 CTSBP07858 339 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 TSPAN7P41732 249 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 IGLV3-21P80748 117 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-203ENST00000378391 RELBQ01201 579 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
PRDM16-203ENST00000378391 LSM10Q969L4 123 aaKnown RBP12.43□□□□□ -0.42
PRDM16-203ENST00000378391 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 HIGD1AQ9Y241 93 aa12.43□□□□□ -0.42
PRDM16-203ENST00000378391 ASXL3Q9C0F0 2248 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 MSGN1A6NI15 193 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 MPV17P39210 176 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 UCP2P55851 309 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 SPEM2Q0P670 501 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 TTTY12Q9BZ98 90 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 ZNF257Q9Y2Q1 563 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 TRGC1P0CF51 173 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 UNC119Q13432 240 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 DLL3Q9NYJ7 618 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
PRDM16-203ENST00000378391 ZNF562Q6V9R5 426 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 DEFB124Q8NES8 71 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 MGST2Q99735 147 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 J3KRW8 73 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 TWIST1Q15672 202 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 SVILO95425 2214 aa12.42□□□□□ -0.42
PRDM16-203ENST00000378391 CEACAM18A8MTB9 384 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 MST1P26927 711 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TFF2Q03403 129 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TMEM45BQ96B21 275 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 FAM90A27PA6NNH2 459 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 CLDN18P56856 261 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TPRX1Q8N7U7 411 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 OR5R1Q8NH85 324 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 SMIM8Q96KF7 97 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 SH3BGRL3Q9H299 93 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TGIF1Q15583 401 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 ZNF841Q6ZN19 808 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 RND1Q92730 232 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 TMUB1Q9BVT8 246 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 LINC00869P0C866 280 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 SSBP2P81877 361 aaPredicted RBP12.41□□□□□ -0.42
PRDM16-203ENST00000378391 ATP6V0BQ99437 205 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
PRDM16-203ENST00000378391 IL36RNQ9UBH0 155 aa12.41□□□□□ -0.42
PRDM16-203ENST00000378391 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 KBTBD11O94819 623 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 SMOC1Q9H4F8 434 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 PLXND1Q9Y4D7 1925 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 FOXL2P58012 376 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 LRRC75BQ2VPJ9 315 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 FOXC2Q99958 501 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 PRDM14Q9GZV8 571 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 SLC25A10Q9UBX3 287 aaPredicted RBP12.4□□□□□ -0.42
PRDM16-203ENST00000378391 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 COX5BP10606 129 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
PRDM16-203ENST00000378391 LOC101059948A0A1B0GTJ6 334 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 NDUFA2O43678 99 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 RPL27AP46776 148 aaKnown RBP12.4□□□□□ -0.42
PRDM16-203ENST00000378391 OR2K2Q8NGT1 345 aa12.4□□□□□ -0.42
PRDM16-203ENST00000378391 PPIAL4EA0A075B759 164 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 DPRXA6NFQ7 191 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 PPIAL4DF5H284 164 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 PRSS2P07478 247 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 PPIAL4FP0DN26 164 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 P2RY6Q15077 328 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 MMDQ15546 238 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 MIC13Q5XKP0 118 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 PRNTQ86SH4 94 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 SCARF2Q96GP6 870 aaPredicted RBP12.4□□□□□ -0.43
PRDM16-203ENST00000378391 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.43
PRDM16-203ENST00000378391 A0A1W2PRD5 423 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 A0A1W2PRF3 423 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 A0A1W2PRM7 423 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 HOXA4Q00056 320 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-203ENST00000378391 SPSB4Q96A44 273 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 TP53BP1Q12888 1972 aaPredicted RBP12.39□□□□□ -0.43
PRDM16-203ENST00000378391 IGHV1-45A0A0A0MS14 117 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 FGF16O43320 207 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 TFPI2P48307 235 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 SPRED2Q7Z698 418 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
PRDM16-203ENST00000378391 NDUFC2O95298 119 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms