RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 SELLP14151 372 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 LHFPL1Q86WI0 220 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
NPHP4-203ENST00000378169 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 CCL3L1P16619 93 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 NAT1P18440 290 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 MC5RP33032 325 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 MEOX2P50222 304 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 FAM3BP58499 235 aaPredicted RBP11.11□□□□□ -0.63
NPHP4-203ENST00000378169 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 SMDT1Q9H4I9 107 aa11.11□□□□□ -0.63
NPHP4-203ENST00000378169 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-203ENST00000378169 ERVFRD-1P60508 538 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 C16orf82Q7Z2V1 217 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 WDFY1Q8IWB7 410 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
NPHP4-203ENST00000378169 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 RNASEKQ6P5S7 137 aaKnown RBP11.1□□□□□ -0.63
NPHP4-203ENST00000378169 LILRB1Q8NHL6 650 aaPredicted RBP11.1□□□□□ -0.63
NPHP4-203ENST00000378169 PROK2Q9HC23 129 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 IGHV1-18A0A0C4DH31 117 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 PSPNO60542 156 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 MPDU1O75352 247 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 TRGC2P03986 189 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 CSN3P07498 182 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 CRISP2P16562 243 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 AMTP48728 403 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 QRFPP83859 136 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 DPPA3Q6W0C5 159 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 BIVMQ86UB2 503 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 DOLPP1Q86YN1 238 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
NPHP4-203ENST00000378169 WDR61Q9GZS3 305 aaKnown RBP11.1□□□□□ -0.63
NPHP4-203ENST00000378169 TRAV20A0A0B4J274 112 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 H3BTX0 84 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 RAMP3O60896 148 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 ZNF253O75346 499 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 COL8A1P27658 744 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 IER3P46695 156 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 MDS2Q8NDY4 140 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 OR9G1Q8NH87 305 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 PLXNB3Q9ULL4 1909 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 A8MXK9 166 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 TPPP2P59282 170 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 OR4C13Q8NGP0 309 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 RNF2Q99496 336 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-203ENST00000378169 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 ANAPC16Q96DE5 110 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 PERPQ96FX8 193 aa11.09□□□□□ -0.63
NPHP4-203ENST00000378169 NOL4LQ96MY1 436 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-203ENST00000378169 RALYQ9UKM9 306 aaKnown RBP11.09□□□□□ -0.63
NPHP4-203ENST00000378169 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 SEC14L6B5MCN3 397 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 Q8WTZ3 238 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 ARL2-SNX15V9GYD0 113 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 J3KRW8 73 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 NDUFA2O43678 99 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 CD55P08174 381 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 ARL14EPLP0DKL9 152 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 LYNX1P0DP58 116 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 PNKDQ8N490 385 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 NPIPB3Q92617 1050 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 TMEM56-RWDD3S4R434 201 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 TLN1Q9Y490 2541 aaKnown RBP11.08□□□□□ -0.64
NPHP4-203ENST00000378169 KIF26AQ9ULI4 1882 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-203ENST00000378169 CHD7Q9P2D1 2997 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 HYPMO75409 117 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 HTR1DP28221 377 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
NPHP4-203ENST00000378169 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 PCDH15Q96QU1 1955 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 C17orf100A8MU93 164 aa11.08□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF343Q6P1L6 599 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 EAF1Q96JC9 268 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-203ENST00000378169 RAXQ9Y2V3 346 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 PTPN13Q12923 2485 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 KBTBD11-OT1A0A1B0GTJ5 212 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 CA2P00918 260 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 APOBEC3AP31941 199 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-203ENST00000378169 NTF4P34130 210 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 TFF3Q07654 80 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 CCDC144NLQ6NUI1 221 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 STARD4Q96DR4 205 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 NAGKQ9UJ70 344 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 B9A039 149 aa11.07□□□□□ -0.64
NPHP4-203ENST00000378169 RRHO14718 337 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms