RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SRXN1Q9BYN0 137 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 CALYQ9NYX4 217 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 FAM222BQ8WU58 562 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 OR5P3Q8WZ94 311 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 RND1Q92730 232 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 ZNF714Q96N38 554 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 GSN-AS1Q9NRJ2 163 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 IGHV3OR15-7A0A075B7D8 119 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 A0A1W2PQM1 296 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 LNP1A1A4G5 178 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 ZNF716A6NP11 495 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 F5H697 171 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 TCF21O43680 179 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 SYNGR3O43761 229 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 S1PR2O95136 353 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 ARL14EPLP0DKL9 152 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 CTSSP25774 331 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 SPATA45Q537H7 98 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 CA5BP1Q8WTZ4 195 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 SFRP2Q96HF1 295 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 TMEM56-RWDD3S4R434 201 aa7.15□□□□□ -1.27
VPS36-201ENST00000378060 C17orf51A8MQB3 221 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 IFNL4K9M1U5 179 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 LEPROTL1O95214 131 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 AMY1AP04745 511 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 CCL1P22362 96 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 KHDC1LQ5JSQ8 128 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 MRPL32Q9BYC8 188 aaKnown RBP7.14□□□□□ -1.27
VPS36-201ENST00000378060 CHCHD2Q9Y6H1 151 aaPredicted RBP7.14□□□□□ -1.27
VPS36-201ENST00000378060 A0A1W2PPE3 182 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 FAM157AC9JC47 383 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 SLC35B1P78383 322 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 ZNF826PQ6ZT77 177 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 MYOZ3Q8TDC0 251 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 GTF3AQ92664 365 aaKnown RBP7.14□□□□□ -1.27
VPS36-201ENST00000378060 UFC1Q9Y3C8 167 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 PGPA6NDG6 321 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 H0YIZ8 118 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 NDUFA2O43678 99 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 RAMP1O60894 148 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 FOLR2P14207 255 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 ZNF137PP52743 207 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 IZUMO4Q1ZYL8 232 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 PRSS33Q8NF86 280 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 KLF14Q8TD94 323 aaPredicted RBP7.14□□□□□ -1.27
VPS36-201ENST00000378060 GFI1Q99684 422 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 FAM117AQ9C073 453 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 ZDHHC8Q9ULC8 765 aa7.14□□□□□ -1.27
VPS36-201ENST00000378060 ZNF207O43670 478 aaKnown RBP7.13□□□□□ -1.27
VPS36-201ENST00000378060 GCHFRP30047 84 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 MMDQ15546 238 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 WDR31Q8NA23 367 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 OR8A1Q8NGG7 326 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 OR51G1Q8NGK1 321 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 REPIN1Q9BWE0 567 aaKnown RBP7.13□□□□□ -1.27
VPS36-201ENST00000378060 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 COA4Q9NYJ1 87 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 TRBV6-7A0A0A0MS04 114 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 PRR32B1ATL7 298 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 RHBDL1O75783 438 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 CLDN18P56856 261 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 TCF15Q12870 199 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 ZNF146Q15072 292 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 ITLN1Q8WWA0 313 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 CCL13Q99616 98 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 C1QTNF5Q9BXJ0 243 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 TNFRSF19Q9NS68 423 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 IDI2-AS1Q9NZ38 188 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 OTOGLQ3ZCN5 2332 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 IGLV3-12A0A075B6K2 115 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 SIAH2O43255 324 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 CRYBB3P26998 211 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 HOXA4Q00056 320 aaPredicted RBP7.13□□□□□ -1.27
VPS36-201ENST00000378060 LRTM2Q8N967 370 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 CLDND2Q8NHS1 167 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 FLVCR1-AS1Q8TAF5 88 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 NABP2Q9BQ15 211 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 TMUB1Q9BVT8 246 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 PILRBQ9UKJ0 227 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 KLF7O75840 302 aaPredicted RBP7.13□□□□□ -1.27
VPS36-201ENST00000378060 SRIP30626 198 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 PRNTQ86SH4 94 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 PAQR4Q8N4S7 273 aaPredicted RBP7.13□□□□□ -1.27
VPS36-201ENST00000378060 FADS6Q8N9I5 356 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 OR5R1Q8NH85 324 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 LOC400499M0QZD8 3231 aa7.13□□□□□ -1.27
VPS36-201ENST00000378060 AKAP6Q13023 2319 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 NUBP1P53384 320 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 ERVFRD-1P60508 538 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 RELBQ01201 579 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 NPCDR1Q9BY65 106 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 IGLV3-32A0A0A0MS00 114 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 TRBV23-1A0A0A0MS06 115 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 REG1BP48304 166 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 RND2P52198 227 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 CCL8P80075 99 aa7.12□□□□□ -1.27
VPS36-201ENST00000378060 TGIF1Q15583 401 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms